| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4530 |
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| Symbol | |
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| ID | 5200090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4981176 |
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| End bp | 4982510 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584083 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001265006 |
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| Protein GI | 148557424 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCG CCCCCGCCCA TCTGGTGATC GCCCGGCTCG CGGCGGTCGA GCGGCCGAGC
GACCTGCGCG CCGCCAGGGG CTACGACCTG TTCTTCGGCT TCGCGTCGGT CAGCCTGATG
CTGTTCGTGC CGCAGCTCAA GTCGCTGACC CCGCTGCTGC TGCTCGTCCT GCTCGCCGTC
CACTGCGTCT GGCGGCGCGA GGACCTTCCC CGCCTGCTGC GCGCGTCGAG CCTCTATCTG
CTGCTGCCGC TGTTCGCGGC GGCCTCCTGG CTCTGGTCGG TCGATCCCTA CGCCAGCCGC
TATTACGGCA TCCAGTTCCT GATCACCGCG CTGATCGGCT GCATCGTCGG CGCCGGGCTC
GACCGCAAGG CGGCGATGCG CGGCGTGTTC CTCGCCTTCG CCGTCTACGG CTTCTCCTCG
CTGATCTTCG GCCGCAGCGT CGCCTGGGGC GGCGGCGCGA TCGGCAGCTC GGCCTTCGCG
GGGCTCGCCC AGGCCAAGAA CACCGCAGGC GATTGCGGCG CCGTCGGCAT CATCCTCTCA
CTCGCCGTGC TGTTCGATGC GATCGAGGAG CGGAAGCCCT GGCTGGCGCT GCTCGCGCTG
GTCGCGATGG CGGTGCAGGC CGACATGCTG ATCGCCTCGC GCTCGTCGGG CGCGGTCCTC
GCGGTCGGCA TCGCGGTGCC GCTGTTCCTG TTGTGGAACC TATCGCGGCT CTTCTCCAGG
CCCGCCCGGG TGGTCACCGG CGTCACCGCG ATCCTCGGCA TCGCGACCGC CGTGCTGACC
CAGCATATCT GGCTGCCGCC GCTGGTGGCG CAGATGTCGC GCGCGCTGGG CAAGGACAGC
ACCCTGACCG GGCGAACCTA TCTCTGGGGC CGGGCGGCCG CGCTGATCGA GGAGAAGCCG
CTGCTCGGGG TCGGCTACAA CGCCTTCTGG CGCAAGGGCA ACCTCGATGC CGAGGGGCTG
TGGCGCTATG CAGGCATCAC CTCGCGCTCG GGCTTCAACT TCCACAGCAC GCCGACCGAG
CTGCTCGTCC ATCTCGGCTA TGCCGGGCTG GCGCTGTTCG TCCTGGTGTT CGTCGCGCTG
TCGATCCTGC TGCTGGTCCG GACGATGATC CGTCCCGACG CGATCATGAT CGGCTGGTGC
ACGCTGCTGA CCTATGAGGT GGTGCGCATG CCGTTCGAAT CGATCGGCAC CGGCCCGTTC
CACTATACGA CCGCGCTGCT CGCCGCCGGG CTGGTCGTCA GCGCCGGCTG GCTGGCGCGC
GGCCATCGCC CCGATCGCCT CCCCGACCGG CCCCGCCGCT TCCGCGGCGA GCGCGAGGTG
CCGGTCAGCG CTTGA
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| Protein sequence | MNGAPAHLVI ARLAAVERPS DLRAARGYDL FFGFASVSLM LFVPQLKSLT PLLLLVLLAV
HCVWRREDLP RLLRASSLYL LLPLFAAASW LWSVDPYASR YYGIQFLITA LIGCIVGAGL
DRKAAMRGVF LAFAVYGFSS LIFGRSVAWG GGAIGSSAFA GLAQAKNTAG DCGAVGIILS
LAVLFDAIEE RKPWLALLAL VAMAVQADML IASRSSGAVL AVGIAVPLFL LWNLSRLFSR
PARVVTGVTA ILGIATAVLT QHIWLPPLVA QMSRALGKDS TLTGRTYLWG RAAALIEEKP
LLGVGYNAFW RKGNLDAEGL WRYAGITSRS GFNFHSTPTE LLVHLGYAGL ALFVLVFVAL
SILLLVRTMI RPDAIMIGWC TLLTYEVVRM PFESIGTGPF HYTTALLAAG LVVSAGWLAR
GHRPDRLPDR PRRFRGEREV PVSA
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