| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4511 |
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| Symbol | |
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| ID | 5200176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4956571 |
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| End bp | 4957764 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640584064 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001264987 |
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| Protein GI | 148557405 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.654674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCC ACAGAATCGA AGATACGGAT ATCCAGATGA GCAACGACAG CGTGCAGCTC
GCCTCTTCCG GGAATGAGGA AGGCAAGGCA TCGCCTCTCC AGAACCCGCG CGTGCGGCGG
ATATTGCTCG TTGCGGTCGC GGTGCTGCTG GTCGGCGCCG TGCTGGGCTT CCTGCGCTAC
CATCTCTACG GCCGCTACCA GCAGTCGACC AACGACGCCT ATGTGCAGGC CGATGCCGTC
ACCGCCGCGC CGAAGGTGTC GGGCTATGTC GACCAGGTGT TCGTGATCGA CAATCAGGAC
GTGAAGGCGG GGCAGCCGCT GGTCCGCATC GATCCGCGCG ACTATCGCGC GCAGGCCGCG
CAGTTCCAGG CGCAGATCGA CGTCGCCCGC GCCAATGCCG CCGGCGTCGA CGCGCAGATG
GGCGAGCAGC AGGCCGCGAT CGCGCGGGCC GAGGCCGACG TCGCGGCGGC CGCCGCCGAT
GCCGGCTTCG CCCAGGCCGA ATATGTCCGC TACCAGCCGC TCGGCGAAAG CGGCGCGGAG
ACACGCGAGA AGGTCTCCCA GCTTCGCAAC CAGGCCGCGC TCGCCAACGC CAAGCTCGCC
GCCGCCAGGG CGTCGCTCGC CAGCGCGCAG CGCCGCGTCG GCACCCTGCG GGCGCAGGTC
AGCCAGGCGC AGGCGCAGGG CGAGGCCGCC CGTGCCCAGC TCGCCGCCGC CAACACCAAT
GTCGAGGCGA CGATCGTTCG CGCCTCGGTC GACGGCCGGA TCGGCGACAA GACGGTGCGG
CAGGGGCAGT TCGTCCAGGC CGGCACCCGG ATGATGAGCG TCGTGCCGAC CCACGACGTC
TATATCGAGG CGAACTTCAA GGAGACGCAA CTCGGCCTGA TGCGGGTCGG CCAGCCGGTG
AAGGTCGAGG TCGATGCGCT GCCCGGCGTC GACATCCCCG GCCGGATCGC CAGCATCTCG
CCCGGCACCG GCGCGCAATT CTCGGTGCTG CCGCCGCAGA ACGCGACGGG CAACTTCACC
AAGATCGTCC AGCGCGTGCC CGTCCGGATC GCGATCAGCC CTGGTCCGGA GACCCGCGCC
CTGCTCGTGC CGGGCATGTC GGTCGAGGTG ACGGTCGACA CGCGCTCGGC CAAGGGCGCC
GCCGACCGGG TCCGCGAGGA GCAGGAACGG CACAATGCCC GGGCCGCGCG ATGA
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| Protein sequence | MARHRIEDTD IQMSNDSVQL ASSGNEEGKA SPLQNPRVRR ILLVAVAVLL VGAVLGFLRY
HLYGRYQQST NDAYVQADAV TAAPKVSGYV DQVFVIDNQD VKAGQPLVRI DPRDYRAQAA
QFQAQIDVAR ANAAGVDAQM GEQQAAIARA EADVAAAAAD AGFAQAEYVR YQPLGESGAE
TREKVSQLRN QAALANAKLA AARASLASAQ RRVGTLRAQV SQAQAQGEAA RAQLAAANTN
VEATIVRASV DGRIGDKTVR QGQFVQAGTR MMSVVPTHDV YIEANFKETQ LGLMRVGQPV
KVEVDALPGV DIPGRIASIS PGTGAQFSVL PPQNATGNFT KIVQRVPVRI AISPGPETRA
LLVPGMSVEV TVDTRSAKGA ADRVREEQER HNARAAR
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