Gene Swit_4507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4507 
Symbol 
ID5196642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4951486 
End bp4952394 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID640584060 
Producthypothetical protein 
Protein accessionYP_001264983 
Protein GI148557401 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0583958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.160603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG CGATCTTCGC CATCCTGCTC CTCTCCGCCG CCGCTCCGGC GATCGCCCAG 
CAATCGCTGC CGGTCGACAA GCGGGTCGAC AAGCTGGAGA AGGAAATGAA GGCCGTGCAG
CGCAAGGTCT TCCCCGGCGG GGCCCAGCAA TATTTCGAGC CCGAGATCAA GCCGCAGGTC
GTGCCGGCGA CGCCGGCCGG CTCCCCGGCC GATTCCGTCG TGACCGACCT GACCCGGCGG
GTCGACGCGC TGGAGAAGGC GCTGGCCCAG CTCACCGGCC AGGTCGAGCA GAACAGCTAT
AATCTGCGCA AGCTGGAGGA TCAGTTCGCC AAGATGAAGG GCGACGCCGA CTATCGGCTG
AACGTGCTCG AAGGCAAGAC GCCGCCGGCC CCGGCCGGCG CGGCGGCCGG CGGCAACCTC
CCCTATGTCG TCCCGCCTCC CCCGAAGGGC GCGGCCGGCG GCGCGGCGGC GGCTCCCGCT
CCGGCGGCGC CCGCGCCCGC GGCCACGTTG AGCGGCGATC CGGGCAAGGA TGCCTATATG
GCGGGCTACG ACCTCTGGAT GCAGAAGAAA TATCCCGACG CGATCGCCGC GCTGAAGGCG
ATGTACGCCA AATATCCGAA GAACAAATAT GCCAGCTACG CCCGCAACCT CGCCGGGCGC
GCCTATCTGG ACAACGGCCA GTATAACGAC GCGATCCGCG AGTTCTTCGA GAACACCAAG
ATCGAGGACG GCGAGCGGGC GCCCCACAGC TACGTCTTCA TGGCCGAGGC GCTGATGAAG
CGGAAGCCGC CGTTGTTCGA CAAGGCCTGC CAGGCCTATG ACGTGCTGCA GGCGAAATAT
CCCGACAAGG TGTCCGGCCC GCTCGCCGAG ATGGTCGCCA AGGGAAGGGC CGATGCCAAG
TGCAAGTGA
 
Protein sequence
MKKAIFAILL LSAAAPAIAQ QSLPVDKRVD KLEKEMKAVQ RKVFPGGAQQ YFEPEIKPQV 
VPATPAGSPA DSVVTDLTRR VDALEKALAQ LTGQVEQNSY NLRKLEDQFA KMKGDADYRL
NVLEGKTPPA PAGAAAGGNL PYVVPPPPKG AAGGAAAAPA PAAPAPAATL SGDPGKDAYM
AGYDLWMQKK YPDAIAALKA MYAKYPKNKY ASYARNLAGR AYLDNGQYND AIREFFENTK
IEDGERAPHS YVFMAEALMK RKPPLFDKAC QAYDVLQAKY PDKVSGPLAE MVAKGRADAK
CK