Gene Swit_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4420 
Symbol 
ID5199085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4869090 
End bp4870064 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID640583972 
ProductSerine O-acetyltransferase 
Protein accessionYP_001264896 
Protein GI148557314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.801461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.831847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCCATGACGA GCCGATCGAG GCCCCCGCGG GTCACTATTG GGACATCGAC 
CGGATCGCGG CCGAGCTTCG CGACGCGCGC GAGGACTGGC GCAACGCGCA CAAGCGCCAT
GCCGAGCATG GCGCCGCCGG CTTCCCGTCG CGCCATGTGA TCGACAAGAT CATGATCGCG
CTGTGCGGCG CGCTGTTCCC GCTGCGGCTG GGGCCGAGCT TCGTCCGCCA GCACAATGAG
GAGGCGTTCG TCGCCGAGAC GCTGCAGACC GCGCTGAGCC GGCTCTACGG CCAGATCCGG
CTCGAGCTCG GCTATTCGGT AGGGGCCGCC GATCCGCATC TCGTCGATGG CGAGGCGGGT
CGGATCATCG GCCATTTCGC GCGCGAGCTG CCGCGCCTGC GGCGGTTGAT CGACACAGAT
GTCGAGGCCG CCTATGCCGG CGACCCGGCG GCGCGCAGCG TCGACGAGGT GCTGATCTGC
TACCCCTGCG TGCTGGCGAT CGTCCATCAT CGGCTGGCGC ATCTGCTGCA CGGGCTGGGC
GCGCCGCTGG TGGCGCGGAT CATCTCCGAG ATCGCCAATT CGCGCACCGG GATCGACATC
CATCCGGGCG CGTCGATCGG CGAATCCTTC TTCATCGACC ATGGCACCGG CGTGGTGATC
GGCGAGACCG CGATCATCGG CCGGCGGGTG CGGCTCTACC AGGCGGTGAC GCTGGGCGCG
CGGAGCTTCC CGGCCGATGC CGACGGGGCG TTGCGCCGCG GCCTCGCGCG GCATCCGATC
GTCGAGGACG ACGTGGTGAT CTATGCCGGG GCGACGATCC TCGGCCGGGT GACGATCGGC
GCGGGATCGA CGATCGGTGG CAATGTCTGG CTGACGACCA GCGTGCCGCC GGGCAGCGTG
ATCAGCCAGG CGCGCGCGCA TCGCGACGGG ATCGCGGAAC TGCTCCGGCT CACGGGAGAC
GAGGATGGCG CATGA
 
Protein sequence
MTDAHDEPIE APAGHYWDID RIAAELRDAR EDWRNAHKRH AEHGAAGFPS RHVIDKIMIA 
LCGALFPLRL GPSFVRQHNE EAFVAETLQT ALSRLYGQIR LELGYSVGAA DPHLVDGEAG
RIIGHFAREL PRLRRLIDTD VEAAYAGDPA ARSVDEVLIC YPCVLAIVHH RLAHLLHGLG
APLVARIISE IANSRTGIDI HPGASIGESF FIDHGTGVVI GETAIIGRRV RLYQAVTLGA
RSFPADADGA LRRGLARHPI VEDDVVIYAG ATILGRVTIG AGSTIGGNVW LTTSVPPGSV
ISQARAHRDG IAELLRLTGD EDGA