| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4414 |
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| Symbol | |
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| ID | 5196803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4863512 |
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| End bp | 4865185 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583966 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_001264890 |
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| Protein GI | 148557308 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0612118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.91404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG ACCTGCAATC GGCCCCGCGA TCGCGGCCGG CGTCACCGTT CGGCGTTCCC
GTTTTCCGGT CGATCTGGAT CGCGTCGCTG GTGTCGAATT TCGGGGCGAT GATCCAGTCG
GTCGGCGCCG CCTGGATGAT GACGTCGCTG ACCTCGTCCC CGAAGATGGT CGCGCTGGTC
CAGGCCTCGA CGGTGCTGCC GTTCATGCTG CTGGCGCTGT GGGCCGGGGC GGTCGCCGAC
AATCTCGACC GGCGCAAGGT GATGCTGGCG GCGCAGAGCT TCATGCTGTG CGTCTCGGCC
GTGTTGGCGC TGTTCGCCTG GCAGGGCTGG CTGACGCCCT GGCTGCTGCT GAGCTTCACC
TTCCTGATCG GTTGCGGGAC GACGATAGGC GGACCGGCCT GGCAGGCCTC GGTCGGCGAC
ATCGTATCGC GCGAGCAACT GCCGTCCGCA GTTGCGCTCA ACTCGATGGG GTTCAACACC
GCGCGGACCG CCGGACCGGC GGTCGGCGGC GCGGTCGTGG CGGCGGCGGG GGCTGCGGCG
GCGTTCCTGG CCAATACCCT GTCCTATATC GGGCTGATCG TGGTGCTGCT GCGCTGGCGG
CGGCCGCAGG CGCCCCGGCT GTTGCCGCGC GAAGGCCTGT TCATGGCGAT GGGGGCGGGC
CTGCGTTATG TATCGATGTC GCCCAACCTG CGGATGGCCG TCAGCCGCGC GATGGCGTTC
GGCCTTGCGG CCAATGCGGT TTCGGCGCTG ATGCCGCTGG TCGCCCGCGA CCTGGTGAAG
GGCGGGGCGC TGACCTACGG CCTGCTGCTG GGCGCGTTCG GCGTCGGCGC GGTGCTCGGC
GGCCTCTCGT CGGGGCCGGC GCGGGACCGG CTGTCGACCG AGCAGATCGT CCGGATGGCC
ACGCTCATGC TGGCGGTCGG CACCGCGATC ACCGCGATCA GCCCCTTCTT CCTGCTGACG
ATCGCCGCGC TGATGCTGGC GGGCTTCAGC TGGGTGCTGG CCCTGTCGAC CTTCAACATC
AGCGTCCAGC TCGCTTCGCC GCGCTGGGTC GTCGCGCGCG CCCTGTCGGT CTACCAGATG
GCGGCGTTCG GCGGCATGGC GATCGGCGCC TGGGTGCTGG GCATGATCGC CGACAGCCAT
GGCGTCGCCG CCGGCCTGCT GGTCAGCGCG GCCTTCCTGG CGAGCACCGT CCTGATCGGC
CTGGTCATGC CGCTGCCGCA GGTCGACGAC CTCAATCTGA CGCCGCTCAA GCAATGGCAG
GAGCCGGAGG TGGCGGTCCC GCTCGAACCG CGCAGCGGCC CGGTGGTGGT GACGATCGAA
TATCGGATCG AGCCGCACAA CATCGTCGCC TTCCTCACCG CGATGACCGA GCGGCGCCGG
ATCCGGCGGC GGGACGGCGC CCATGGCTGG ACCCTGCTGC GCGACCTCAA CGAGCCCGAG
CTGTGGATCG AGCGCTACCA CGTCGCGACC TGGCACGACT ATATCCGGCA TAATCAGCGT
CGCACCCATG CCGATGCCGA GAACAGCGCC GAGGTGCACC AGCTCCAGAA GGAAGGCGTG
CCGCTGCGCG TCCACCGGAT GATCGAGCGG CAGACCGGCT CGCTGCCGAG CGCCCGCCGC
CATGAACCGG TGACCGTCGA CGCACAGATG AACGATCCGA CACGCTCGGC GTAG
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| Protein sequence | MASDLQSAPR SRPASPFGVP VFRSIWIASL VSNFGAMIQS VGAAWMMTSL TSSPKMVALV
QASTVLPFML LALWAGAVAD NLDRRKVMLA AQSFMLCVSA VLALFAWQGW LTPWLLLSFT
FLIGCGTTIG GPAWQASVGD IVSREQLPSA VALNSMGFNT ARTAGPAVGG AVVAAAGAAA
AFLANTLSYI GLIVVLLRWR RPQAPRLLPR EGLFMAMGAG LRYVSMSPNL RMAVSRAMAF
GLAANAVSAL MPLVARDLVK GGALTYGLLL GAFGVGAVLG GLSSGPARDR LSTEQIVRMA
TLMLAVGTAI TAISPFFLLT IAALMLAGFS WVLALSTFNI SVQLASPRWV VARALSVYQM
AAFGGMAIGA WVLGMIADSH GVAAGLLVSA AFLASTVLIG LVMPLPQVDD LNLTPLKQWQ
EPEVAVPLEP RSGPVVVTIE YRIEPHNIVA FLTAMTERRR IRRRDGAHGW TLLRDLNEPE
LWIERYHVAT WHDYIRHNQR RTHADAENSA EVHQLQKEGV PLRVHRMIER QTGSLPSARR
HEPVTVDAQM NDPTRSA
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