Gene Swit_4384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4384 
Symbol 
ID5198745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4837124 
End bp4837918 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID640583936 
Producthypothetical protein 
Protein accessionYP_001264860 
Protein GI148557278 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCG TGGATTGGCT CAACGCGCTC GCCGGCCTGC TGGTCGGGAC CATTGTCGGC 
ATGACGGGCG TCGGCGGCGG ATCGCTGATG TCGCCCATCC TGATCCTGCT GTTCGGTGTC
GCCCCGGCGA CGGCGGTCGG CACCGACCTG TGGTTCGCCG CGGCGACCAA GACGGTCGGG
TCGATCGTCC ACCACCGGCA GAACAGTGCC GACCATCGCA TCGTCGGATG GCTGTGCCTG
GGCAGCATCC CCGCAGCGGT GCTGACGCTG GTGCTGCTCT TCGAGTTCGG CGGGCATCAG
GAGAAGAGCG GGTTCATCGT CACCCTGCTC GGCGGCATGC TGATCATAAC CTCGTTCGCG
ACGCTGTTCC GGCGCCGGCT CGTCCACGCG ATGATCGACA CCGACGACGA GGTGAAGGCG
CGCCGTTTCA TCCGGTTCCA GCCGGTCCTG ACCGTCGCGG CGGGGGCGGT GCTCGGGACG
CTCGTCACGC TGACGTCGGT CGGGGCGGGG GCGTTGGGGG CGACGCTGCT GCTGATGCTC
TATCCGCTAC GGCTGACCGC GCGGAAACTG GTCGGCACCG ACATCATGCA CGCGGTGCCG
CTCACCCTGG TCGGAGGGAT CGGCTATCTG ATCGCCGGAA GCGTCGACCT GCGGCTGCTC
GGCATGCTGC TGATCGGATC GATCCCCGGC ATCGTCATCG GATCGCGGTT GACCCTGTGG
CTGGACGAGC GGATCATCCA GCGCTGCCTG GCGGTGGTGC TGTTCATCAC CGGCATCAAG
CTGGTGACCG TTTAG
 
Protein sequence
MIPVDWLNAL AGLLVGTIVG MTGVGGGSLM SPILILLFGV APATAVGTDL WFAAATKTVG 
SIVHHRQNSA DHRIVGWLCL GSIPAAVLTL VLLFEFGGHQ EKSGFIVTLL GGMLIITSFA
TLFRRRLVHA MIDTDDEVKA RRFIRFQPVL TVAAGAVLGT LVTLTSVGAG ALGATLLLML
YPLRLTARKL VGTDIMHAVP LTLVGGIGYL IAGSVDLRLL GMLLIGSIPG IVIGSRLTLW
LDERIIQRCL AVVLFITGIK LVTV