Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4384 |
Symbol | |
ID | 5198745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4837124 |
End bp | 4837918 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640583936 |
Product | hypothetical protein |
Protein accession | YP_001264860 |
Protein GI | 148557278 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCCCG TGGATTGGCT CAACGCGCTC GCCGGCCTGC TGGTCGGGAC CATTGTCGGC ATGACGGGCG TCGGCGGCGG ATCGCTGATG TCGCCCATCC TGATCCTGCT GTTCGGTGTC GCCCCGGCGA CGGCGGTCGG CACCGACCTG TGGTTCGCCG CGGCGACCAA GACGGTCGGG TCGATCGTCC ACCACCGGCA GAACAGTGCC GACCATCGCA TCGTCGGATG GCTGTGCCTG GGCAGCATCC CCGCAGCGGT GCTGACGCTG GTGCTGCTCT TCGAGTTCGG CGGGCATCAG GAGAAGAGCG GGTTCATCGT CACCCTGCTC GGCGGCATGC TGATCATAAC CTCGTTCGCG ACGCTGTTCC GGCGCCGGCT CGTCCACGCG ATGATCGACA CCGACGACGA GGTGAAGGCG CGCCGTTTCA TCCGGTTCCA GCCGGTCCTG ACCGTCGCGG CGGGGGCGGT GCTCGGGACG CTCGTCACGC TGACGTCGGT CGGGGCGGGG GCGTTGGGGG CGACGCTGCT GCTGATGCTC TATCCGCTAC GGCTGACCGC GCGGAAACTG GTCGGCACCG ACATCATGCA CGCGGTGCCG CTCACCCTGG TCGGAGGGAT CGGCTATCTG ATCGCCGGAA GCGTCGACCT GCGGCTGCTC GGCATGCTGC TGATCGGATC GATCCCCGGC ATCGTCATCG GATCGCGGTT GACCCTGTGG CTGGACGAGC GGATCATCCA GCGCTGCCTG GCGGTGGTGC TGTTCATCAC CGGCATCAAG CTGGTGACCG TTTAG
|
Protein sequence | MIPVDWLNAL AGLLVGTIVG MTGVGGGSLM SPILILLFGV APATAVGTDL WFAAATKTVG SIVHHRQNSA DHRIVGWLCL GSIPAAVLTL VLLFEFGGHQ EKSGFIVTLL GGMLIITSFA TLFRRRLVHA MIDTDDEVKA RRFIRFQPVL TVAAGAVLGT LVTLTSVGAG ALGATLLLML YPLRLTARKL VGTDIMHAVP LTLVGGIGYL IAGSVDLRLL GMLLIGSIPG IVIGSRLTLW LDERIIQRCL AVVLFITGIK LVTV
|
| |