Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4365 |
Symbol | |
ID | 5200081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4819944 |
End bp | 4820501 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640583919 |
Product | amine dehydrogenase |
Protein accession | YP_001264843 |
Protein GI | 148557261 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02659] methylamine dehydrogenase light chain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.840344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA TGGACAGTTT CGCCGAACGC GCGGTGCGCA GGGTCGCCCG CCGCACCTCC CGCCGCAGCC TGCTCACCCT GATCGGGGGA GCGATCACGG GGGCGGCGGT CATCCCGGTG CTGCCGGTGT CGCGCGCCGT CGCCTCCACC CATGGCGGCG GCAAGAGCGG CCTGCCGCCG CAGACGACCG GCAATCCGCA GGACCCGGGC GACCAGACCC AGTGCGATTA CTGGCGCTAT TGCGCGATCG ACGGTTTCCT CTGCTCCTGC TGCGGCGGCA CCGCGAGCGC CTGCCCGCCG GGGACCGAGA TGTCGCCGAT CACCTGGATC GGCACCTGCC TGAACCCGGC CGACGGACGG TCCTACATCA TCAGCTACAA CGACTGCTGC GGTAAATCCT CGTGCGGGCG CTGCCTGTGC AACCGCAACG AGAGCGACCG GCCGATGGTC CGCCCGCAGT CGAACAACGA CATCAACTGG TGCCTCGGGA CCGAGAGCGG GTCGGTCTAC AACTGCTCGA CCGCCGTCAT CCTCGGCACC GCGCTGGACA GCAAATGA
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Protein sequence | MSDMDSFAER AVRRVARRTS RRSLLTLIGG AITGAAVIPV LPVSRAVAST HGGGKSGLPP QTTGNPQDPG DQTQCDYWRY CAIDGFLCSC CGGTASACPP GTEMSPITWI GTCLNPADGR SYIISYNDCC GKSSCGRCLC NRNESDRPMV RPQSNNDINW CLGTESGSVY NCSTAVILGT ALDSK
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