Gene Swit_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4365 
Symbol 
ID5200081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4819944 
End bp4820501 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID640583919 
Productamine dehydrogenase 
Protein accessionYP_001264843 
Protein GI148557261 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02659] methylamine dehydrogenase light chain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.840344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA TGGACAGTTT CGCCGAACGC GCGGTGCGCA GGGTCGCCCG CCGCACCTCC 
CGCCGCAGCC TGCTCACCCT GATCGGGGGA GCGATCACGG GGGCGGCGGT CATCCCGGTG
CTGCCGGTGT CGCGCGCCGT CGCCTCCACC CATGGCGGCG GCAAGAGCGG CCTGCCGCCG
CAGACGACCG GCAATCCGCA GGACCCGGGC GACCAGACCC AGTGCGATTA CTGGCGCTAT
TGCGCGATCG ACGGTTTCCT CTGCTCCTGC TGCGGCGGCA CCGCGAGCGC CTGCCCGCCG
GGGACCGAGA TGTCGCCGAT CACCTGGATC GGCACCTGCC TGAACCCGGC CGACGGACGG
TCCTACATCA TCAGCTACAA CGACTGCTGC GGTAAATCCT CGTGCGGGCG CTGCCTGTGC
AACCGCAACG AGAGCGACCG GCCGATGGTC CGCCCGCAGT CGAACAACGA CATCAACTGG
TGCCTCGGGA CCGAGAGCGG GTCGGTCTAC AACTGCTCGA CCGCCGTCAT CCTCGGCACC
GCGCTGGACA GCAAATGA
 
Protein sequence
MSDMDSFAER AVRRVARRTS RRSLLTLIGG AITGAAVIPV LPVSRAVAST HGGGKSGLPP 
QTTGNPQDPG DQTQCDYWRY CAIDGFLCSC CGGTASACPP GTEMSPITWI GTCLNPADGR
SYIISYNDCC GKSSCGRCLC NRNESDRPMV RPQSNNDINW CLGTESGSVY NCSTAVILGT
ALDSK