| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4349 |
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| Symbol | |
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| ID | 5196844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4799174 |
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| End bp | 4800295 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583903 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001264827 |
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| Protein GI | 148557245 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.360906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG GTTTCTACAC CGACGAACGC TGCTTCTGGC ATTCGGTCGG GATGCAGGCG
CTGTTCCTGC CCGTGGGCGG CTGGGTCCAG CCTCCTTCGG GCGCGGCCGG CGCGGACACG
CCCGATTCCA AGCGACGGCT GCTCTCGCTG GTGCAGGCGA GCGGGCTGAT CGATCATCTG
GCGGTGGCGA GCGCCGATCC CGTCAGCCGG GAGGACATGC TCCGCGTCCA CACGGTCGAC
TATATCGACC GCTTCAAGGC GACGAGCGAC GCGGGCGGCG GCGATCTCGG CGGCTTCGCG
CCGTTCAGCC AGGGCGGCTA CGAGATCGCG GCGCTGTCGG CGGGGCTGGC GAAGCGGGCG
GTCGACGACG TGCTGTCGGG CCGGCATCGC AACGCCTATG CGCTGTGCCG CCCGGCCGGC
CATCACTGCC TGCCCGACGG GTCGATGGGC TTCTGCCTGC TGTGCAACAT CCCGATCGCG
ATCGAGGCGG CGCGCGCCCG CCACGGCGCG CTGCGCGTCG CGGTGGTCGA CTGGGACGTC
CATCACGGCA ACGGCACCCA GGCGGTCTAT TACGGCCGCG ACGACACGCT CACCATCTCG
CTCCACCAGG AGAATTGCTT CCCGCCCGGC TATAGTGGCG AGGAGGATCG CGGCGAGGGC
AGGGGCGCCG GCTGCAACCT CAACATCCCC TTGCCGCCGG GCGCGGGCGA CGAGGCCTAT
CGCCACGCGC TGCGGGCGCT GGTGATCCCG GCGATCGAGC GCTTCCGTCC CGACCTGATC
GTCGTCGCCA GCGGCCTCGA CGCCGGCGCC GCCGATCCGC TCGCCCGGAT GCTCGTGCAC
AGCGAGACCT TCCGCGCGAT GACCGGCGAG CTGATGGCGC TCGCCGACCG GCTGTGCGGC
GGCAAGCTCG TCGTCGTCCA TGAGGGGGGC TATTCGGAGG CGGTGGTGCC GTTCCTCGGC
CTCGCCATCA TCGAGACGCT CAGCGGCCAT CGCACCGACG TGGTCGACCC CACGCTCGAC
ATCTTCGTGC CGCAGCAGCC GGGGGCGAAG TCGCTCGCCT TCCAGCGGCA GGTGATCGAC
GAGATGGTCG AGGCCTGGAC AGCGTCGCAG GCCGGGATCT GA
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| Protein sequence | MTTGFYTDER CFWHSVGMQA LFLPVGGWVQ PPSGAAGADT PDSKRRLLSL VQASGLIDHL
AVASADPVSR EDMLRVHTVD YIDRFKATSD AGGGDLGGFA PFSQGGYEIA ALSAGLAKRA
VDDVLSGRHR NAYALCRPAG HHCLPDGSMG FCLLCNIPIA IEAARARHGA LRVAVVDWDV
HHGNGTQAVY YGRDDTLTIS LHQENCFPPG YSGEEDRGEG RGAGCNLNIP LPPGAGDEAY
RHALRALVIP AIERFRPDLI VVASGLDAGA ADPLARMLVH SETFRAMTGE LMALADRLCG
GKLVVVHEGG YSEAVVPFLG LAIIETLSGH RTDVVDPTLD IFVPQQPGAK SLAFQRQVID
EMVEAWTASQ AGI
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