| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4338 |
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| Symbol | |
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| ID | 5198582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4783770 |
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| End bp | 4784447 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583892 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001264816 |
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| Protein GI | 148557234 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.513534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGACA AGGGATTTGC CAGTATCGAC CAGGCGGTCG CGGACATCTT CGACGGGGCG
TCGGTGATGG TCGGCGGCTT CGGCACCGCC GGCATGCCCG ACGAGCTGAT CGACGCGCTG
ATCGCCCGCA ACGTCGGCGG GCTGACGATC ATCAGCAACA ATGCCGGCAA TGGCGAGACG
GGCCTCGCGG CGCTGATCAA GGCCGGGCGG GTACGCAAGG TGATCTGCTC CTTCCCCCGC
CAGGCGGACT CGCACCATTT CGACGCGCGC TACCGCGCCG GGGAGATCGA GCTGGAGCTG
GTGCCGCAGG GCAACCTCGC CGCGCGCATC CAGGCCGCGG GCGCCGGCCT CGGCGCGATC
TTCACCCCGA CCGGCTTCGG CACCCTGCTC GCCGAGGGCA AGGAGACGCG GCGGATCGAC
GGCAAGGACT ATGTGCTCGA ATATCCGATC CACGCCGATT TCGCGCTGAT CAAGGCGCAG
CGGGCGGATC GCTGGGGCAA TCTGGTATAC CGCAAGACCG CCCGCAACTT CGGCCCGATC
ATGGCGATGG CGGCGAAGAC CGCGATCGCG CAGGTGGCCG AGATCGTGCC GCTCGGCTCG
CTCGATCCCG AAGCGATCGT GACCCCCGGC ATCTTCGTGC AGCGCGTCGT CCAGGTCGCG
CCCGGCGCCG CCCATTGA
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| Protein sequence | MIDKGFASID QAVADIFDGA SVMVGGFGTA GMPDELIDAL IARNVGGLTI ISNNAGNGET
GLAALIKAGR VRKVICSFPR QADSHHFDAR YRAGEIELEL VPQGNLAARI QAAGAGLGAI
FTPTGFGTLL AEGKETRRID GKDYVLEYPI HADFALIKAQ RADRWGNLVY RKTARNFGPI
MAMAAKTAIA QVAEIVPLGS LDPEAIVTPG IFVQRVVQVA PGAAH
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