Gene Swit_4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4333 
Symbol 
ID5197799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4779501 
End bp4779968 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID640583887 
Producthypothetical protein 
Protein accessionYP_001264811 
Protein GI148557229 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC CGCGCAAGGC GCCAGCCGCC ACCCCCAAGA TCAACGCCCC CAGGGAGAAG 
AAGATGTCGC TGAGTTTCGC AACCGCCCAG AAGATCGTCA CCGATGCCGT CGAGACGGCG
GGCAGCCAGG GCGTCGGCGT CGCGGTCGTG GTCGTCGATC GCGGCGGCCG GGTCGTCGCC
TCGGCCCGCG CGGACGGCGT CGGCTACATC AACCTCGACA TCGCCGAGCG CAAGGCGGTG
GCATCGGCCA ATTTCGGCGC GCCGACGCTG GGCGTGCTGG AAATGGCCAA GGGCGATGCG
GCACTCTACG CCTCGGTGAT CGGCGACGCT TCGCTGTCGA TCCTGCCCGG CGGGATGCCG
ATCATGATCG AGGGGCAGCC GGCGGGCGCG GTCGGCATCG CCGGCGGCCA TTATTCGCAG
GACCATGCGA TCGCCGAGAC GGTGGTCGGC CGGCTCGCGC ACGACTGA
 
Protein sequence
MARPRKAPAA TPKINAPREK KMSLSFATAQ KIVTDAVETA GSQGVGVAVV VVDRGGRVVA 
SARADGVGYI NLDIAERKAV ASANFGAPTL GVLEMAKGDA ALYASVIGDA SLSILPGGMP
IMIEGQPAGA VGIAGGHYSQ DHAIAETVVG RLAHD