| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4329 |
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| Symbol | |
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| ID | 5197703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4772451 |
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| End bp | 4773824 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583883 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001264807 |
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| Protein GI | 148557225 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.87285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCATG CCGCGACGAC CGCGGAAACC GAGCCGGACG GGTCGGCGGC GCGGCGCGGC
GTGCGTCCGT GGACCACCGT CTGGATCCTC ACCCTGCTCT ACGCGGTCGC CTATTTCGAC
AAGCGGCTGA TCACCCTGCT GATCGATCCG ATCCGCGCGA CGATCGGCGC CACCGACCTG
CAGATGAGCC TGTTGTCGGG GGCGGCCTTC GTCTCCTTCT ACGTGATCTT CTCCTTCCCG
ATCGGCTGGG CGGTCGACCG CCTGTCGCGG CGCGGCATCA TCTTCTGGGG CGTGGCGAGC
TGGTCGACCT TCGCCGCGCT CGGCGGCTTC GCGCGCAGCT TCTGGCAGCT GCTCGGATCG
CGCTTCGGCG TCGGCGCGGG CGAGGCGGCG CTGATGCCCG CCGCCCATTC GATGATCGCC
GACCTGTTCC CGCGCGAGAA GCTGTCGCGC GCGCTGGGCA TCTTCACCCT CGGCGCGTTC
ATCGGATCGG CGCTGTCCTT CGCGATCGGC GGGGCGATGC TCAGCCATTT CAAGCGCGGC
GCGACCGTCG ACCTTCCGCT GGTCGGCGCG CTGTTCCCCT GGCAGGCGGT GCTGCTGCTC
GCCAGCCTGC CCGGCATCCC GCTCGCGCTG CTGATCTTCC TCGTCCGCGA GCCCGCCCGC
AGCCACGGCC ATGCGCCCAG GATCGGGTCG GGCAGCGGAC GGGCCTGGTT CGGCCGCCAC
AAGAGCTTCT ACGCGCTGCA CTTCATCGGC TTCAGCACGC TCGCGATCAT GACCGCCGGC
TTCTCCTCCT GGCTGCCGAC CCACATGATG CGCAGCTTCG GCGAGCCGGT CGCGCGGGTC
GGCATGCTGC TCGCCATCTT CCAGCTCACC GTCGGGCCGC TCGGCATGCT GCTGGTCGCG
CGCACCGTCG ACCGGATGTT CAAGGCGGGG CGGCTGGACA TCCACATGAC CTTCTACGTC
TGGGGCGTGC TCGTCCTCGC CGCCGCGGGC ATGCTGGTCG GCCTCGCCCC CAACGCGATC
GCCGCCTATG TCGGCGTGGT CCTGTTCGAC TCGCTGCACG GCGGCTTCCT GCCGGTCGCG
GGCGCGGTGC TTCAGCTCAC CACGCCCAGC CAGTTTCGCG GGCAGGCCAC CGCCATCTTC
TTCGTCTTCT ACAATGTGAT GGGCCAGGCG CTCGGCCCGA TCGCGGTCGC CACCTCGACC
GACCTGCTGT TCGGCAGCGA CCGGATGATC GGCCCCGCCA TCGCGCTGAC CTGCGCGATC
GTCGGCCCCG TCACCGCGCT CCTCCTCCTT CGTAGCCGCC GGCCGATGCG CGCGGCGCTG
GCCGACGCCG AAAGCGTCGC CGCTGCGGCC GCCACAACCG GGAACCAGAA CTGA
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| Protein sequence | MDHAATTAET EPDGSAARRG VRPWTTVWIL TLLYAVAYFD KRLITLLIDP IRATIGATDL
QMSLLSGAAF VSFYVIFSFP IGWAVDRLSR RGIIFWGVAS WSTFAALGGF ARSFWQLLGS
RFGVGAGEAA LMPAAHSMIA DLFPREKLSR ALGIFTLGAF IGSALSFAIG GAMLSHFKRG
ATVDLPLVGA LFPWQAVLLL ASLPGIPLAL LIFLVREPAR SHGHAPRIGS GSGRAWFGRH
KSFYALHFIG FSTLAIMTAG FSSWLPTHMM RSFGEPVARV GMLLAIFQLT VGPLGMLLVA
RTVDRMFKAG RLDIHMTFYV WGVLVLAAAG MLVGLAPNAI AAYVGVVLFD SLHGGFLPVA
GAVLQLTTPS QFRGQATAIF FVFYNVMGQA LGPIAVATST DLLFGSDRMI GPAIALTCAI
VGPVTALLLL RSRRPMRAAL ADAESVAAAA ATTGNQN
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