| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4327 |
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| Symbol | |
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| ID | 5197701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4770195 |
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| End bp | 4771622 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583881 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001264805 |
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| Protein GI | 148557223 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGAA CATTCTTCGA GAAGGTCTGG GACGACCATG TCGTCGCCGA TCTCGGCGAC
GGCGCCTTCC TGATCCACAT CGACCGTCAC TTCCTGCACG AGGTGAGCGG CGCGGTGTCG
CTGAAGGAGA TCGACGCCCG CCACCGCACC GTCCGCAACC CGGAGCTGAC CTTCGGCACC
GTCGACCATG TGCTGGAGAC GGTGCCCGGG CGCGGCATGA CCACCCGCAT GCCGGGCGGC
GACGATTTCC TGCGCGAGTT CACCGAGCGG ATCGGGCCGC ACGGCATCCG CTTCTTCGAC
CTCCATGACC GGCGCCAGGG CATCGTCCAC GTCATCGCGC CCGAGCTGGG CGTCGCGCTG
CCGGGGATGA CCTTCATCTG CGGCGACAGC CACACCTGCA CGGTCGGCGG CGTCGGCGCC
TTTGCCTGGG GCGTCGGATC GAGCGACAGC GAGCATGCGC TGGCGACCCA GACCGTCATC
ATGACCAGGC CGAAGACGCT GCGCGTCAAC TTCACCGGGC AGCTGCGCCC GGGGGTCCAC
GCCAAGGACA TGATCCTGGC GCTGATCGCC AAATATACCG CCGACGGCGG CACCGGCTAT
GCGATCGAGT TCGCCGGCGA GGCGGTCCGT TCACTGCCGA TGGACGGCCG CCTGACGCTC
TGCAACATGG CCGTCGAGTT CGGCGGCCGG ACCGGCACCG TCGCGCCCGA CGAGATCACC
TTCGCCTATC TCCGGGATCG CGAATTCTCG CCCAGGGGCG CCGACTGGGA CCGCGCCGTC
GCCTATTGGC GGACGCTCCC GAGCGACGCC GACGCGGCCT ATGACATGGA ATATGAGCTC
GACTGCTCGA CGCTGGAGCC GCAGGTCACC TGGGGCACCA GCCCCGAGCA CAGCGTCGCG
ATCGGCGGCG TCATGCCCGA TCCCGCCGCC TCCGCCGATC CGATCGCCCG CACCTCGCGC
CAGCGCGCCG CCGACTATGC GGAGATCGAG CCGGGCGCGT CGGTGATGGG CCTGCCGATC
ACCGGCGCCT TCATCGGCTC CTGCACCAAC AGCCGGATCG ACGATCTGCG CGCCGCCGCC
GCGATCCTGA AGGGCCGCAA GGTCGCCGAG GGAGTCACCG CGATCTGCAG CCCGGGATCG
ACCGCGACCA AGCTGCTCGC CGAGGCGGAG GGGATCGACC GGATCTTCAT CGAGGCGGGC
TTCGAATGGC GCGAGTCCGG CTGCTCGCTG TGCATGAGCG GCGCGACCGG GGGCGAGAGC
TTCCCGCGCG ACGCCCGCGT CATCGCCTCC ACCAACCGCA ATTTCGAGGA CCGGCAGGGG
CCGCACGTCC GCTCCCATCT CGCCAGCCCC GTCACCGTCG CGGCCTCGGC GATCGCCGGC
CGCATCGCCG ACGCCCGCGC GTTCGCCAGC AAGGAAGACG AGCAATGA
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| Protein sequence | MGRTFFEKVW DDHVVADLGD GAFLIHIDRH FLHEVSGAVS LKEIDARHRT VRNPELTFGT
VDHVLETVPG RGMTTRMPGG DDFLREFTER IGPHGIRFFD LHDRRQGIVH VIAPELGVAL
PGMTFICGDS HTCTVGGVGA FAWGVGSSDS EHALATQTVI MTRPKTLRVN FTGQLRPGVH
AKDMILALIA KYTADGGTGY AIEFAGEAVR SLPMDGRLTL CNMAVEFGGR TGTVAPDEIT
FAYLRDREFS PRGADWDRAV AYWRTLPSDA DAAYDMEYEL DCSTLEPQVT WGTSPEHSVA
IGGVMPDPAA SADPIARTSR QRAADYAEIE PGASVMGLPI TGAFIGSCTN SRIDDLRAAA
AILKGRKVAE GVTAICSPGS TATKLLAEAE GIDRIFIEAG FEWRESGCSL CMSGATGGES
FPRDARVIAS TNRNFEDRQG PHVRSHLASP VTVAASAIAG RIADARAFAS KEDEQ
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