Gene Swit_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4296 
Symbol 
ID5197975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4736101 
End bp4736586 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID640583850 
ProductMarR family transcriptional regulator 
Protein accessionYP_001264774 
Protein GI148557192 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID[TIGR02337] homoprotocatechuate degradation operon regulator, HpaR 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAATT CGGCGGAGCT GCTCTACGGG CAGGATGGTC CGGACCAGCG CGCGTCGGAC 
GTCTATCGCG CCCTGCCGGT CAAGCTACAC CAGACGCGGG AGGCGTTCGC CAACGCCTTC
CGGCCGATCT TCCTCCAATA TGACCTGACC GACCCGCAAT GGCGGGTGCT GCGCATCCTC
GGCGCGGTGG AGGAGATCGA CACGGCGGCG CTGGCGAAGC GATCGCTGCT GCTCGGGCCG
AGCCTGTCGC GCATCCTGCG CGACCTGCAC GAACGCTCGC TGATCAGCCG CCGGACCAGC
GAGGACGATG CGCGGCGCTT CTTCCACGCG ATCACCGCCG AGGGGCGATC GCTGATCGAC
AAGATCACGC CCCGCTTCAC ACCCCTCTAC GAGCGCATCG CGGAGCAGAT GGGCGAGGAC
GAGATCGCGA CCCTCAACGG CCTGCTCGAC AAGGTCGCCG CGATCGTCTC GGCCGCCGGG
GACTGA
 
Protein sequence
MRNSAELLYG QDGPDQRASD VYRALPVKLH QTREAFANAF RPIFLQYDLT DPQWRVLRIL 
GAVEEIDTAA LAKRSLLLGP SLSRILRDLH ERSLISRRTS EDDARRFFHA ITAEGRSLID
KITPRFTPLY ERIAEQMGED EIATLNGLLD KVAAIVSAAG D