| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4283 |
|---|
| Symbol | |
|---|
| ID | 5199263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4725352 |
|---|
| End bp | 4726020 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640583837 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001264761 |
|---|
| Protein GI | 148557179 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0724479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.899409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG ACGACACCGC CCCCGCCCTG CTGTCCGACC GCATCCGCAA CGCCCTGACC
GACGAGATCG CGCGTGGCGA GCTGGCGGCG GGAACCCAGC TCGATGAGCA GCAGCTCGGC
GACCGCTTCG GCGCGTCGCG CACCCCGGTC CGCGAGGCGC TCCGCCAGCT TGCGGTCAGC
GGGCTGGTCG AGCTCCGCCC CCGGCGCGGC GTGGTCGTGA CCCGGCTGAC GCCCGGACGG
ATCATGGACA TGTTCGAGGC GATGGCCGAG ATCGAGGCGA TGTGCGTGCG GATGGCGACC
AACCGCATGT CGCCGCTCGA ACGCAGCCGG CTCATCCAGC TCCACGACAG CTCGGCGGGC
TTCGTCGCGG CGGGCGACGT CGACGCCTAT GACGCGTTCA ACCGCGAGTT CCATGAGCTG
CTCTACCGCG CGACGCACAA CGAGGTGCTG GTCGAGCAGG CGATCGCGAT CCGCACCCGC
CTCACCGCCT TCCGCCGCAC CCAGCTTCGC CAGGGCAACC GGATCATTCG ATCGCGCGAG
GAGCATGACG GCGTCATGGC CGCGATCGCC GAAGGCGACG GCGACACCGC CGCCCGCCGC
ATGCGCGCCC ATATGCTCAA CGCCGCCAGC GCCTTGGAAC GCTATATCGC CGATCATGCG
AACGGCTGA
|
|---|
| Protein sequence | MTVDDTAPAL LSDRIRNALT DEIARGELAA GTQLDEQQLG DRFGASRTPV REALRQLAVS
GLVELRPRRG VVVTRLTPGR IMDMFEAMAE IEAMCVRMAT NRMSPLERSR LIQLHDSSAG
FVAAGDVDAY DAFNREFHEL LYRATHNEVL VEQAIAIRTR LTAFRRTQLR QGNRIIRSRE
EHDGVMAAIA EGDGDTAARR MRAHMLNAAS ALERYIADHA NG
|
|---|
| |