| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4282 |
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| Symbol | |
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| ID | 5199262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4723081 |
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| End bp | 4725300 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583836 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001264760 |
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| Protein GI | 148557178 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.030658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.745652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAT CTGTTGTGAC CAAGTGGATG CTGCTGGCGG GCGTCGCCCT GAGCGCGGGA
AGCGCCCAGG CCGAGCAGGC GGCTTCCGAA GCGGGCCGGG CGGTGGACGA CGCCGCGTCG
AGCGGCGCGA CCGGCGATAT CGTGGTGACG GCGCTGCGCC GCGAGACCAC CTTGCAGAAG
ACGCCGGCGG CGGTCGCGGC CATCTCCGGC GAGGAGCTGC AGGCGCGCGG CATTTCCGAC
ATCCAGGATC TCGCCGCCGC GGTGCCCAGC GTGTCCTTCG GGCAGACGAT CGGGCAGGCG
CACATCGCCG TGCGCGGCAT CGGTTCGGAC GTCGTCACCG CCGGCCAGGA CCCGCGCGTC
GCCTTCTACC AGGACGGCGT CTATATCGCC CGGCCGGGCG CGCAGCTCGG CGGGATGTTC
GACGTCGATC GCGTCGAGGT CCTGAAGGGG CCGCAGGGCA CGCTCTACGG CCGCAACGCC
ACCGGCGGCG CGGTCAGCGT GGTCAGCCGC AAGCCGACCG ACACGCTGGA GGGCTATGTC
CGGACGGGCT ATGGCAATTA CAATGCTGTC ACCCTCGACG GCGCGATCTC CGGGCCGATC
GCGGAGACGC TTACCGCGCG GATCGCCGGG CATTTCGAGC ATCGCGACGG CTATGGCAAG
AACCTGGTCA CCGGCAAGGA CATCGACGAC AAGCGCGAGG TGGCGTTGCG CGGCGCGATC
GCGTGGCGGC CGAGCGACAG GCTCGAGCTG CTGACCACGG TCGATTATTT CCGCGAGTCC
GACAATGCGT TCGGCCTCCA TTATTTCAAC CAGGGTAACC CCAATGTGCC GGTGCTGGGC
CTGAAGCTGG GCGGCCTTGC CGCTCGGAAC AGCCGCGACA TCTACAGCGA CGTCGACCCG
AAGGCGCGGA CCCGGTCCTG GGGGATCACC GAGGAGATCA GCTTCGACGC CGACTGGGCG
AAGCTCCGGT CGATCACCTC CTACCGCAAG TTCAAGGGCT TCTACCTGAC CGACATCGAC
GGGACGAGCG TTCAGCTCGC CTATGACAAG CTGTTCGAGA ATGCGAAGCA GTTCAGCCAG
GAAGTGCAGC TCGACGGCGA GGTCGATCGC TTCGCCTGGC TGGTCGGCGC GCTCTACTTC
CATGAGAAGA ACGACGGGGC CGGCTCGGAG ATTCCGATCA ATTCGGTGGT GGCCGGCGGC
CCCTTCAGCC TGCGCCAGGC CTTCCTGTCG ATCGGCGACC TCAAGACCGA GTCCTTCTCG
GCCTATGCGC GGGTCACCTT CGATGCGACC GACTGGCTCA AGCTGACCGC GGGCGGCCGC
TACAACTGGG AGAAGAAGAG CATCTCCGAC GTCTTCCAGT TCGATTTCTC GCGGCCCTAT
GTGCCGGGCG CGCCGATCAT CCCGATCCCG CCCTTTCCGC GATCGACCAG CGACAGCTTC
TCCGGCTTCA CGCCCAGCGC GACCGCCGAG CTGCGCCTGA GCCCATCGGT CTTCGCCTAT
TTCACCTATA GCCAGGGCTT CAAGAGCGGC GGCTACAACA TCGGCGTCGC CCAGGCGGCC
TTCCGGCCCG AGAAGATCAA GAGCTACGAA GCCGGCGTGA AGACCACCAC CTTCGACGGG
CGGCTCAAGG CCAACCTGAT CGGCTTCCAC TACGACTACA GCAATCTCCA GGTGTCGCAG
GTCCGCGGGC AGAGCACGCT CGTCGAGAAT GCGGCGGCGG CCAAGGTCGA CGGGATCGAG
GCGGAGCTGA TCGCCGAACC CGTCCGCGGT TTCAGCTTCG GCGGCAACCT CTCCTATCTC
GATGCCAAAT ATAAGGACTT CCTCAGCATC GATCCGATCA ACGTCGCGGC CGGGCCCCAG
GACCTGTCGG GCAACCGGCT GACCCAGGCG CCGAAGATCT CCTACGCCCT GTTCGCGCAG
GGGAAGTGGG ACGTCGGGGA CTACACGCTG ACGCTGCGCG GCGATTACAA CCGCATCGGA
CTGCAATATT TCACGCCCTT CAACAATCCG ATCGTCGCGC AGGACGGCTA TGGCGTGGGC
TCGGCGCTGG CGCGGATCGA GAGCGAAGCG GGCTGGTCGG TCGAGGCCTA TGTCCGCAAC
ATCGGGAACA CCAAGGCGAT CGCCCAGACC TATGTCTCGT CGGGGATGTT CGGCTTCCCC
GTGCTGGGAG CGCTGATCCC GCCGCGCACT TACGGCCTGA CGCTAGGCTA CAAGCTTTAG
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| Protein sequence | MRKSVVTKWM LLAGVALSAG SAQAEQAASE AGRAVDDAAS SGATGDIVVT ALRRETTLQK
TPAAVAAISG EELQARGISD IQDLAAAVPS VSFGQTIGQA HIAVRGIGSD VVTAGQDPRV
AFYQDGVYIA RPGAQLGGMF DVDRVEVLKG PQGTLYGRNA TGGAVSVVSR KPTDTLEGYV
RTGYGNYNAV TLDGAISGPI AETLTARIAG HFEHRDGYGK NLVTGKDIDD KREVALRGAI
AWRPSDRLEL LTTVDYFRES DNAFGLHYFN QGNPNVPVLG LKLGGLAARN SRDIYSDVDP
KARTRSWGIT EEISFDADWA KLRSITSYRK FKGFYLTDID GTSVQLAYDK LFENAKQFSQ
EVQLDGEVDR FAWLVGALYF HEKNDGAGSE IPINSVVAGG PFSLRQAFLS IGDLKTESFS
AYARVTFDAT DWLKLTAGGR YNWEKKSISD VFQFDFSRPY VPGAPIIPIP PFPRSTSDSF
SGFTPSATAE LRLSPSVFAY FTYSQGFKSG GYNIGVAQAA FRPEKIKSYE AGVKTTTFDG
RLKANLIGFH YDYSNLQVSQ VRGQSTLVEN AAAAKVDGIE AELIAEPVRG FSFGGNLSYL
DAKYKDFLSI DPINVAAGPQ DLSGNRLTQA PKISYALFAQ GKWDVGDYTL TLRGDYNRIG
LQYFTPFNNP IVAQDGYGVG SALARIESEA GWSVEAYVRN IGNTKAIAQT YVSSGMFGFP
VLGALIPPRT YGLTLGYKL
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