| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4277 |
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| Symbol | |
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| ID | 5197547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4717207 |
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| End bp | 4718868 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583831 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001264755 |
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| Protein GI | 148557173 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.968608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGG GGGGCAGCGA GGGCAGCTAC GACTATATCG TCGTCGGCGG CGGGAGTTCG
GGCTGCGTGA CCGCCGGCCG GCTCGTCCGG GAACAGGGCG CCCGCGTCCT GCTGCTCGAA
GCCGGCGGCG ACGACGACGA TCCGCTGATC CGGATGCCGG CGGGCACGTT CAAGATGATG
CTGGGCGGAA GCCCGCACAT CAAATCCTAC CAGTCCAGCC CCCAGCCGCA CCTCGCCGGG
CGCATCGTCC CGATCCCGCA GGGCAACGTC ATCGGCGGCG GCAGCTCGGT GAACGTCATG
GCCTATATGC GGGGCTGCGA GGAGGATTAT GCGCGCTGGG ACGCGGCGAT CGGCGGCGGC
TGGTCCTGGG CGGACATGCT GCCCCATTTC CGGCGGCAGG AGGGCAATGT CCGCCTCGAC
GACGAAAGCC ATGGCAGCGA CGGCCCGCTC AAGGTCTCCG ATCCGCACTA CAAGGTCAGC
GCGACGAGCT ATTTCCTGCG GACGATGCAG AAGCGCGGCC TCCCCTTCCG CCACGACTTC
AACGCCGGCG AACTGGTCGG CGTCGGCTAT CTCCAGACGA CGATGGACGG GCCGCGGCGG
TGCAGCGCGG CCGACGCCTT CCTCGCCCCC TGCCGCGCCG ATCCCCGCCT GACGATCGCG
ACCAACGCCG TCGCGACCCG CGTCAGGGTG GAGGACGGCA GGGCGGTCGG CGTCGAATAT
CGGCACAAGG GCCGGCCCTG CTTCGCCGCC GCGACCCGGC AGGTGATCCT GACCGCCGGG
GCGCTCGCCA CGCCCAAGCT GCTGATGCTG TCCGGGATCG GCGATGCCGA CCATCTCCGC
GCGCACGGCA TCGACCCCAT CGTCGACCTG CCCGGCGTCG GGCAGAATCT GCAGGACCAT
GTGGTCGTGC GCCTCACCAC GGCCACCAAC GGCGCGTTCG GCTATTTCGG CCAGGATCGC
GGCTTCCGGA TGATCGTCAA CGGCCTGCGC TACCTGCTGT TCAAGGACGG GCCGGTGTCG
TCGAACGGCG CGGAGTGCAT CGGCTTCGCC AGTCTCGACG CGCCCGACGG CGCCGCCGAC
ACCCAGCTCT ACTGCCTGGG GATCATGTGG CCGTCCGCTT ATTCCGGGCC GGTGACGCAC
GGCGTGACGC TGATGGCCAG CCTGACCCAG CCGCGCTCGC GCGGCAGCGT GCGGCTCCGC
TCGTCCGATC CGTTCGACGA TCCGATCGTC GACCTCAACT GGCTGAGCGA GCAGGCCGAC
GCCGACCTGC TGGTCAAGGG CCTGCGCTAC CTGCGGCAGA TCGCGGGCAG CGAGCCGCTC
GCCTCGATCA TCGCCGAGGA GCGCGCGCCC GGCCCACTCC TCCAGTCGGA CGACGACCTC
GAACGCTATG TCCGCGAGAC GGCCGAGAGC GCCTATCATC CGGTCGGCAC CTGCCGCGCG
GGAAAGGACG GCGATCCGAT GGCGGTGCTG ACCCCCGACC TGCGGGTTCG CGGCGTCGAC
GGCCTGCGGG TGTTCGACGC GTCGATGATG CCCAATATCG TCTCGGCCAA CACCAACGCG
GTCGTCATGG CGGCCGCCGA TCGCGGCGTC GACCTGATGC TGGGTCGCGC GGGTCAGTTC
AGGAGAGGAA GCCCTGCACC GTCTCCTGGA GCAGGCCCTT GA
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| Protein sequence | MDKGGSEGSY DYIVVGGGSS GCVTAGRLVR EQGARVLLLE AGGDDDDPLI RMPAGTFKMM
LGGSPHIKSY QSSPQPHLAG RIVPIPQGNV IGGGSSVNVM AYMRGCEEDY ARWDAAIGGG
WSWADMLPHF RRQEGNVRLD DESHGSDGPL KVSDPHYKVS ATSYFLRTMQ KRGLPFRHDF
NAGELVGVGY LQTTMDGPRR CSAADAFLAP CRADPRLTIA TNAVATRVRV EDGRAVGVEY
RHKGRPCFAA ATRQVILTAG ALATPKLLML SGIGDADHLR AHGIDPIVDL PGVGQNLQDH
VVVRLTTATN GAFGYFGQDR GFRMIVNGLR YLLFKDGPVS SNGAECIGFA SLDAPDGAAD
TQLYCLGIMW PSAYSGPVTH GVTLMASLTQ PRSRGSVRLR SSDPFDDPIV DLNWLSEQAD
ADLLVKGLRY LRQIAGSEPL ASIIAEERAP GPLLQSDDDL ERYVRETAES AYHPVGTCRA
GKDGDPMAVL TPDLRVRGVD GLRVFDASMM PNIVSANTNA VVMAAADRGV DLMLGRAGQF
RRGSPAPSPG AGP
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