| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4257 |
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| Symbol | |
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| ID | 5197162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4693297 |
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| End bp | 4695564 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640583811 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264735 |
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| Protein GI | 148557153 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.737167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGG AACGATCGAT CATGACCGTG CGGCTCGCCG CGTTGGCGGC GGGTGCCAGC
CTGCTGGCGT TCGGCAATCC GTCCTACGCC CAGACCGGGG CGTCGGAGGA TGTCGAGGGC
GTCGAGGCGA TCACCGTCAC CGCGCGGAAG CGCGAGGAGC GGTTGCAGGA GGCGCCGATC
TCGATAACCG CGCTGTCGTC CGCGACGCTC GAACGCGCCC AGGTCGGCAC GATCGCCGGC
ATCTCGAACT TCACGCCCAA CCTGATCCTC AATGAATCGG CGGCGATCTC GGGCAACAAC
GCTGCCACCA CGACCTTCAT CCGCGGCATC GGGCAATATG ACTTCACCCC GACGACCGAG
CCGGCGGTCG GCCTCTATGT CGACGGCGTC TATGTCGCGC GGTCGGTCGG CGCGCTTCTC
GACGTCGCAG ACGTCGAGCG TGTCGAGGTG CTGCGCGGGC CGCAGGGCAC ATTGTTCGGC
CGCAACACCA TCGGCGGCGC GGTCAGCATC ACCTCGCTGC GGCCGAGCGA CGATGCGTTC
GAAGGCTATG TCGACGTGCG GACCGGAAGC TTCGAGCGCT TCGACGCCAA GGCCGCCGTC
AACATCCCGA TCGCCGAGGG ACTGGCCGTC CGCGCCTCGG GCTCGCGGCG CAGCCGGGAA
GGCTATGTCC GCCGCGTTTC GGACGGCGTC CGCAACGGCA ACCAGGATAG CTGGTCCGGC
CGCATCGACA TGCTGGCGGA AACCGAGGGC GGCTTCCGCG CCCGCCTGAT CGTCGACGGA
ACGCGCCGCC GCGAGAACAT GGCGGCCAAT CAGCTCGTCG CCGTCTATCC CAATGCGGGT
TTCGTGCAGG TCTACAATAC GCAGGTCGCC GGCGCGGCCT GCACGCCCAA CCCCGGGCCG
GTCGGCAACA GCCTCTGCTA CAATTCGCAA TGGATTCCGC AGAAGGGCGA GCGGATCACC
TACGGCACCT TTCCCTCCCA GTCGGACCTC GACCTGTGGG GCGTCTCGCT CAACCTCGAG
CAGGAGATCG GCAAGGTCAC GATCAAGTCG ATCTCGGCCT ATCGCGACAT GAAGTCGATC
TCCTCCCGCG ACGGCGATCA TTCGCCGCTG CGCATCTTCG AGACCGTCGA CGATTACGAC
CAGTGGCAGT TCAGCCAGGA ATTCCAGGTG CTGGGAACGT CGTTCGACGA TCGCCTGAAA
TGGATCGCCG GCGCCTATTA TTTCAAGGAG AAGGGCGGCG ACGCCAACAT GGTCTATACC
TCGCGGATCG ACTTCATGTC CGGCGGCCGG ATCGACAATG ACTCGGCGGC GCTGTTCGGC
CAGGCCACGT TCGACGTCAC CGACAAGCTG TCGGTCACCG GCGGCCTGCG CTACACGAAG
GACTGGAAGC GCTTCCTGCC CGATCAATAT GTGACCAATT CCGGCCTGAC CCCGTTCCCG
GTCGGATCGC GGCTGGCGCC GTACGTCAAG TACAGGTCGA CCTATCACGA CCTCAACCCG
ACGGCGGACG TCAGCTACAA ATTCTCGCGC GACATCATGA CCTATTTCCG TTTCTCGGAG
GGGTTCAAGA GCGGCGGCTA CGCATTCCGC TTCTTCCCGC CCACCACCAC CGTACCCGAC
TATCAGCCCG AATATGCCAA GGTCTACGAA CTCGGCTTCA AGTCGACGAT GTTCGACCGC
CGGCTGCAGT TCAATGCCGC CGTCTTCCGC ACCGACTATA CCAATATCCA GGTCAGCGGC
ATTCCGACCG GGCGGGTCGG CGCGATCACC TTCAACGCCG GCGATGCGCG CATCCATGGC
GGCGAGGTCG AAATCTCGGC GCGGCCGATC CCGCCGCTGC GGTTCCAGTT CGGCGCGGGC
TATCTCGATG CGGGATATCG CAACGTTCCA ACCAACCTCG GCGCGATCGA CGTGAACAAC
GACTCCCGCT TCGCCTATGC GCCGACCTGG TCGCTGACCG GCAACGCTTC CTACGAGATC
GAGACGGGCA TCGGAACGAT CACGCCGCAG CTCGACTGGA GCTATCGGAC CAAGGTCTAC
GGCAACCCCG CCAATACGCC GGCGGCGATC CAGCCGGGCT ATCATCTCGT CAACGGCAGC
ATCGCCTGGC GCGACCCGTC GGGCGTCTGG CAGGTCACCG CGGGCGTGAC CAACCTGTTC
GACAAGCGCT ACTTCACGAC CGCCTATGCC AGCCCGAGCG TCGGCTACTC CGAAGTCCTG
TTCGGTCGTC CGCGCGAATG GTTCCTGGGC GTCCGGCGCA GCTTCTGA
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| Protein sequence | MNRERSIMTV RLAALAAGAS LLAFGNPSYA QTGASEDVEG VEAITVTARK REERLQEAPI
SITALSSATL ERAQVGTIAG ISNFTPNLIL NESAAISGNN AATTTFIRGI GQYDFTPTTE
PAVGLYVDGV YVARSVGALL DVADVERVEV LRGPQGTLFG RNTIGGAVSI TSLRPSDDAF
EGYVDVRTGS FERFDAKAAV NIPIAEGLAV RASGSRRSRE GYVRRVSDGV RNGNQDSWSG
RIDMLAETEG GFRARLIVDG TRRRENMAAN QLVAVYPNAG FVQVYNTQVA GAACTPNPGP
VGNSLCYNSQ WIPQKGERIT YGTFPSQSDL DLWGVSLNLE QEIGKVTIKS ISAYRDMKSI
SSRDGDHSPL RIFETVDDYD QWQFSQEFQV LGTSFDDRLK WIAGAYYFKE KGGDANMVYT
SRIDFMSGGR IDNDSAALFG QATFDVTDKL SVTGGLRYTK DWKRFLPDQY VTNSGLTPFP
VGSRLAPYVK YRSTYHDLNP TADVSYKFSR DIMTYFRFSE GFKSGGYAFR FFPPTTTVPD
YQPEYAKVYE LGFKSTMFDR RLQFNAAVFR TDYTNIQVSG IPTGRVGAIT FNAGDARIHG
GEVEISARPI PPLRFQFGAG YLDAGYRNVP TNLGAIDVNN DSRFAYAPTW SLTGNASYEI
ETGIGTITPQ LDWSYRTKVY GNPANTPAAI QPGYHLVNGS IAWRDPSGVW QVTAGVTNLF
DKRYFTTAYA SPSVGYSEVL FGRPREWFLG VRRSF
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