Gene Swit_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4246 
Symbol 
ID5196523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4679542 
End bp4680285 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID640583800 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001264724 
Protein GI148557142 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC TTCCCGACCT CGCCGACGAA GCCGGCGCGC GCTTCCACCT CGCCGCGCTG 
TACCGGCTGA TCGACCATCA TTTCCCGTCG ACCGACGGCA TCTACAACCA TATCAGCCTG
CGCGTGCCGG GCCGGCCCGA CGATATGCTG ATCAAACGGC ACCATCTTCT CTACGAGGAG
GTGACGGCGT CCAACCTGGT CGTCGCGGAC ATGACCGGCG ACCTCGACGA GGGCAGCGAG
GTCAACCGGC CCGGCTTCGT CCTGCACGGC GCGATCCTGC GGGCGCGGCC GGACCTGAAC
TGCGTCGTCC ACATCCATTC CAATCCCGGC CTGGCGATGA GCGCGCATGG CGGCGGGCTG
CGGATGCTGT CGCAGAACGC GCTGCGCTTC TACAGGCGGA TCGGCTCGCA TCCCTATGAG
GGGATCACCG ACGGCCCGGC CGAGGGACCG CGCATCGCGG CGGCGCTGGG GACGGACAAT
ATCGCGGTGA TCCTGCAGAA CCACGGGCTC GCCGTCGCAG GCCGGACGCC CCGCGAAGCC
TTCGAGCGGA CTCGCGACCT GATCATCGCC TGCGAGACGC AGCTGATGCT CGAAGCGACC
GGCGCCGCGG TGATCGAGAT TCCCGAACCG GTGTGCGAAC GGGTCGCGCG CCAATATGTC
GCCCATGACG CGGGCCGGGG CTCGGCCGAC TGGCCGGCCT GGATACGGCG GCTCGATCGG
CTCGACCCCG GCTATCGCGC CTAG
 
Protein sequence
MTALPDLADE AGARFHLAAL YRLIDHHFPS TDGIYNHISL RVPGRPDDML IKRHHLLYEE 
VTASNLVVAD MTGDLDEGSE VNRPGFVLHG AILRARPDLN CVVHIHSNPG LAMSAHGGGL
RMLSQNALRF YRRIGSHPYE GITDGPAEGP RIAAALGTDN IAVILQNHGL AVAGRTPREA
FERTRDLIIA CETQLMLEAT GAAVIEIPEP VCERVARQYV AHDAGRGSAD WPAWIRRLDR
LDPGYRA