Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4245 |
Symbol | |
ID | 5196522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4678698 |
End bp | 4679525 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640583799 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001264723 |
Protein GI | 148557141 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.126058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGGCC CGGCGGGCCT GCTCGACGGC CGGGTCGCGG TGGTGACCGG CGCGGCGCGC GGCATCGGCC GGGCGATCGC CGCGCTGTTC CTGGAGCAGG GCGCGACGGT GGTCGCGGGG GACGTGGCGC CGATCGACCT CGATCATCCC CGCTGCACCG CGATCGCCTG CGACGTGCGC CGCGAGGAGG AGATGGCGGC GCTGTTCGAC CGGGCGATCG GCGACCATGG CCGGATCGAT TGCCTGGTCA ACAATGCCGC GAGCCCCGGC GCGATCGACG GCATCGCGAC GCTGGCCGCC CGGCAGTTCG ACGAGACCGT CGCCACCGTC CTGCGCAGCA CCTTCCTGGG CATGCATCTC GCGCTGCCGG GCCTGCGCCG GTCGGACGCC GGCTCGATCG TCAACATTGG ATCGACCTCC GCGCTGGTCG CGGCGCCGGT GCTGCAAGCC TATGGGGCGG CCAAGGCGGG CGTGGCGATG CTGACCCGCA ACGCGGCGCT CGAACTCGGG CCGCTGGGCA TCCGGGTCAA TTGCCTGTGC CCCGGCGGCA TCGCGACCGC GATGTACGGC ATCGCCGCCG GGCTGGAGCC CGACGCGGCG GAGGCCGCCC GCGACCGCGT CGCCGCCAAT CTGGGGCCGT TGCAGCCGCT CGGCCGCGCC GGCCGGCCCG AGGAGGTCGC GCAGGCGGCG CTGTTCCTCG CGGGCCCCTG GTCGAGCTAC GTCACCGGGC AGGTGATCGC GGTCGACGGC GGGATGAGCG TTGGCCGCGC CATGCCGGCG GACACCGCGC CGCAAGACTT CTTCCGCCGC GTGGTGGGTA TCGACTGA
|
Protein sequence | MSGPAGLLDG RVAVVTGAAR GIGRAIAALF LEQGATVVAG DVAPIDLDHP RCTAIACDVR REEEMAALFD RAIGDHGRID CLVNNAASPG AIDGIATLAA RQFDETVATV LRSTFLGMHL ALPGLRRSDA GSIVNIGSTS ALVAAPVLQA YGAAKAGVAM LTRNAALELG PLGIRVNCLC PGGIATAMYG IAAGLEPDAA EAARDRVAAN LGPLQPLGRA GRPEEVAQAA LFLAGPWSSY VTGQVIAVDG GMSVGRAMPA DTAPQDFFRR VVGID
|
| |