Gene Swit_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4244 
Symbol 
ID5196521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4677931 
End bp4678701 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content70% 
IMG OID640583798 
Productpeptidase S15 
Protein accessionYP_001264722 
Protein GI148557140 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.100247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGA TCGGCGCGGG GGGCATCGCC CTGACCGGCG AGGACATCCG CATCGCGGCG 
GGCGACGGCG TGGAACTCGA CCTGATGCTC TATCGCCCGG CGATCGCGGC GGCGGTGTTG
CCCGCCGTCA TCCTCTGCCC CGGCGGGGTC GGCACCGGCA TGTTCGAGAT CGTCGAGTGG
CTGGCCGGGC CGCTGCGCGA CGCCGGCTTC GTGGCGGTGA CGATGAACTG GCGGTCGGGC
CTGCCCGACC GTGACCCGGA CGACGTGTCG GCGGCGATCG ACTGGCTGAG CGCCCAGCCC
GGCGTCGATC CCTCGCGGAT CGGGGTGATG GGCATGTCGC GCGGCGGCAA CGCGGCGCTG
CGCGCGACCG CGCTCGATCC CCGGATCAGG GCCTGCGCGA CCTTCGGCGC GGTGACAGAC
CTGTTGCAGC AGGCGGTGAG CGTGAAGGAC TATGCGCCGG GGCGCTACCG GATGTTCCTC
GACTGGCTGG GATCGCCCGA CGAGCATGCC GACCGCTACC GGGCGGTGTC GGCGATCACC
CATGCCGCGA AGATCGGCCA GCCGCTGCTG ATGGTCCATG GCCAGCACGA CATGCATTCC
CCGCCCGAAC AGTCGCTGTG GATGGACGAG GCGGTGCGGC GCGGCGGCAA TGCCGACAGC
CGGGTCGAGA TCGTCCCGAT GATGTGCCAT TATGGCGACG TCATCCCCAA CCATTTCGGC
TTCGACCGGC TCCGCGCGCT GATCCTGCCT TTCCTGATCG ATCGGCTGTG A
 
Protein sequence
MTRIGAGGIA LTGEDIRIAA GDGVELDLML YRPAIAAAVL PAVILCPGGV GTGMFEIVEW 
LAGPLRDAGF VAVTMNWRSG LPDRDPDDVS AAIDWLSAQP GVDPSRIGVM GMSRGGNAAL
RATALDPRIR ACATFGAVTD LLQQAVSVKD YAPGRYRMFL DWLGSPDEHA DRYRAVSAIT
HAAKIGQPLL MVHGQHDMHS PPEQSLWMDE AVRRGGNADS RVEIVPMMCH YGDVIPNHFG
FDRLRALILP FLIDRL