| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4239 |
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| Symbol | |
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| ID | 5197658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4672671 |
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| End bp | 4673609 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583793 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001264717 |
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| Protein GI | 148557135 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.117477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGG ACAACCTTGC CACCATGGCG CAGATCGACC GGCTGATCCT CTCGATCGGA
GAGGATGATT TCGGCGAGGC GCTGTTCCAC ACCACGCAGA TGGTCGGCGA CGTCGACCAT
GTCATGGTGT TCGCCTTCGC GGAGGAGGAG GATCGCCCCC GCGTCGTGAT CAACACGGGC
CTGATCCCGG CGGCGACGGC GGCCGACGCC GCGGCCGCCT ATGTCGAGGA GCTCTACGCG
CTCGACCCCA ACCTGCCGCA GGTCCGCGCC CAGCCCGAGG GGCGAGCCGG CTGGTTCGAG
TTCGACGGCG GGCGCGGCTG GGACGAGCGG CTGCACCGCG GCTTCCTGGT GCCGACCGGG
GTCAGCGACA TGATCCTGTT CGCGGTGATG CAGGAGAAGG TGGTCTATCT CGTCCAGATG
CACCGGCTCT ACGGCCATCA TTTCGCGCGC GCGCAACGCT GGCTGCTGAC CCAGATCGGC
GAACTGATCG CGGCCAACAT CCGCAAGCAT TTCTCCTACA TGCACACGCT GCGCGGGCCC
AACCAGTTCC TGATCGGCCG GGTGCTCACC GAAGCCGCGT TGTTCCAGTC GATCACCCCG
CGCGAGCGGC TGGTCTGTAT CGGCATCCTC ACCGGGCACA CCTCCGAAAG CATCGCGCGG
AACCTGTCGA TCTCGGTCAA CAGCGTGCTG ACCTATCGCA AGCGGCTCTA CGAGAAGCTG
GAGATCAGTT CGCAGAACGA GCTCTTCGTC CGCATCATCG ACGCGCTGAT GCGGCTCAAC
TGGGACGGGC GGGAGGTGCC GACGCCCGCC GGCCGGATGG AGGTCAACGC ATCGCGGGCG
CGACTGCGCG GCCGTCCGCT GGCGGCGGAC CTGGCCTTCG CGCAGGCCTT CTTCGATCGG
TCCAAGACCC AGCCTGTCGC AAGCCATTGG GATAACTGA
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| Protein sequence | MALDNLATMA QIDRLILSIG EDDFGEALFH TTQMVGDVDH VMVFAFAEEE DRPRVVINTG
LIPAATAADA AAAYVEELYA LDPNLPQVRA QPEGRAGWFE FDGGRGWDER LHRGFLVPTG
VSDMILFAVM QEKVVYLVQM HRLYGHHFAR AQRWLLTQIG ELIAANIRKH FSYMHTLRGP
NQFLIGRVLT EAALFQSITP RERLVCIGIL TGHTSESIAR NLSISVNSVL TYRKRLYEKL
EISSQNELFV RIIDALMRLN WDGREVPTPA GRMEVNASRA RLRGRPLAAD LAFAQAFFDR
SKTQPVASHW DN
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