Gene Swit_4236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4236 
Symbol 
ID5197655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4669884 
End bp4670651 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID640583790 
Productalpha/beta hydrolase fold 
Protein accessionYP_001264714 
Protein GI148557132 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0388465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATA TTTTCCTGCA GAGCCGGTTC GGCCGGGTGC ATTGCCGCGC GACCGGCGGC 
GGCCAGCCGC TGTTCCTGAT GCACAGTGCC GGGCGGTCGG CCTATGAGTT CGACGCGCTG
GCGCATTTGC TGGCGGGCCG TTTCCGCGTC GTTGCCTGGG ACATGCCCGG CCATGGCGAT
TCCGACCGGC CGCAGGGTCA TGTGACGCTG CCCGACCTCG CCGATCTCGC GGCCGAGCTC
GCCTGCGCGC TCGGCGAACG GCCGATCCTC GGCGGCGGAT CGGTGGGGGC GGCGATCGCG
CTGGCCGCGA CGGCGGGCCC GCGCGCCGCC GAGCTGGGCG GGATCGTCGC GATCGAGATG
CCGCTGTCGC GCGACGCCGG CTGGTGGGCC GCCAACTGGC CGATGATCGA GACCATGTTC
GGCTGCCCCG AGGAGCCCGA GGCGCGCGCG CGGCCGCGCT TCCGCGACTG GTCTCCCGAG
TTCGCCGCGC GACTGGCGAT CGACCGGCAC AAGGCCGGCA GCCATGCGAT GATGGACCTG
CTCTGGGCCG GCCGCGACGA TGCCGACCAT GTCCAGCCGC GCATCCGCGC GCTCGCCCTG
CCCGCGCTGT TCGTCAACGG CGACCGCGGC GTCGCGCCCG AGGCGGCGAC GCTGCTGCCG
TCGCTCCACC CCGCCGCCAT GCTGCGCATC GTCGCCGACA GCGGCCATTT TCCGCACAGC
GACGATCCGC AGGCCGTGGC CCGGGCGATC GAGGAGATGT TCGCATGA
 
Protein sequence
MDDIFLQSRF GRVHCRATGG GQPLFLMHSA GRSAYEFDAL AHLLAGRFRV VAWDMPGHGD 
SDRPQGHVTL PDLADLAAEL ACALGERPIL GGGSVGAAIA LAATAGPRAA ELGGIVAIEM
PLSRDAGWWA ANWPMIETMF GCPEEPEARA RPRFRDWSPE FAARLAIDRH KAGSHAMMDL
LWAGRDDADH VQPRIRALAL PALFVNGDRG VAPEAATLLP SLHPAAMLRI VADSGHFPHS
DDPQAVARAI EEMFA