Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4218 |
Symbol | |
ID | 5196256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4647499 |
End bp | 4648107 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640583772 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001264696 |
Protein GI | 148557114 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.135159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTAG AAGACGGAAC GAAAGCCGCT ATCATCGAAG CGTCCATCAA GCTCTTCTAC AACAAGGGCT ATCGCGGCAC GTCGATGCCG GACATCGCCA GCGAATGCAG CATCACCCCG GCGGCGATAT ATTACCACTT CAAGAACAAG GAGCAGGTCC TCTGGTCCTG CTACGAGAAC CTCGTCGAGG AGCTGAACGA GCGGGTCATC AAGGAGGTCA ACAAGTTCGA CGACCCCAGG GCCAAGCTCG AACGGTTCAT CGAGATCGTC TTCAACATAT GGTTCGACCG GCCCGAACTC TCGCTGCTCC AGGCGGGGCC AATCGCCGAC CTCTCGGCCA AGCGGACGTT CCAGTACAAG GTGCACCGGG CGAACTGGTT CAAGTTCGTC TACGACCTCA TCGCCGAACT GGGCGGCTCC TTCCGCTCCG ACGAGGAGTT GCGCTTCTCC TCGCTCATCC TGTCCAAGTC GCTGTCCTAT CCCGAAACCC TGATCGGCGA GTTCGGATAT GACCACGAGG ACGTCAGCGA CGACGTCAAG AAGAACATAC TGGTCATGCT GAAGAAGTTC TACGTCCAGG CGCTGACCGG CGAGCGCTTC CCCGGCTGA
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Protein sequence | MDVEDGTKAA IIEASIKLFY NKGYRGTSMP DIASECSITP AAIYYHFKNK EQVLWSCYEN LVEELNERVI KEVNKFDDPR AKLERFIEIV FNIWFDRPEL SLLQAGPIAD LSAKRTFQYK VHRANWFKFV YDLIAELGGS FRSDEELRFS SLILSKSLSY PETLIGEFGY DHEDVSDDVK KNILVMLKKF YVQALTGERF PG
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