| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4216 |
|---|
| Symbol | |
|---|
| ID | 5196254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4645744 |
|---|
| End bp | 4646835 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640583770 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001264694 |
|---|
| Protein GI | 148557112 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.862058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGGA ATATCGAAGT CGGAGTTTTC ATTCCCGTCG GCAAGAATGG CTGGATCCAT
TCGGTCAACA CGCCGTACAC GCCCGGCAGC TTCCAGCATG TCCTCGACGT CGTACAGCGC
TCGGAGGCGC TCGGTTTCGA TTTCGTGCTC AGCCCCGCCA TCTGGCGCGG CCGGAAGGGG
CCGTCGCGGC ACTGGATGGA TTCGCTCGAG TCGCTCACCA CGACGGCGGC GCTGCTCCAG
GCGACCAGCC GGATCGAGAT TTTCGGCACC GTCCACATGA CGGTGTTTCC GCCCGCCACC
ATCGCCAAGA TGATCGCCAC CCTCGATCAG ATCGGCGCGG GGCGGGTCGG CCTCAACCTG
GTGACCGGAT CCAGCTATCT GGATCTCGCG CATCTCGGGC TCTGGAACGA CGAGCTCAAC
CATGACGAGC GCTACGACAT GGCCGACGAA TGGGTCCATC TCGTCAAGCG GCTGTGGACC
GAGGAGATCG TCGACCATAA GGGCCGCTTC TTCGCGACCG AGGCGGCGAC CATGGGCCCC
AAGCCGTCGC GCATGCCGAA GCTGGTCAAT GCGGGCGCGT CGCCGCGCGG GATCAAGTTC
GCGGCCGACA ATTGCGACAT CGCCTTCATC TCGGCGAGCG ACGGGCCCAA ATTCATCGCG
ACCGCGCGGC AGTGCAAGGA GGCGGCGCGC GCCATGGGCA AGCCGAACCT CAAGACGTTC
GGGCTGGTCA CCGTCATCCC CGGCGAGACG GACGCGGAAG CCCAGGCGCG CCTGGACCAT
TTCAACGCGG GCGTGGACCG CGAATGCCTC GCCGACATAG CCGCCGGCTA TGAGCAGAAC
CGCAGCGCCA AGGCGTTGAG CGAGGCATCG CTGTCGCTGA CCGGCGGCGA GAAGCAGAGC
TGCGTGATGC CGGGCGAGCT GGTCGGTTCC TATGAGACGC TGGCGCGCCG GCTGTCGGTC
ACCGCGCTCG AAGGCGAACT CGACGGGCTG ATGCTGGTCG TCCCCGACTA TATCGAGGAC
CTGGCGGCGA TCGCCAACCG AACCCTGCCG CTGATGGAGC GGTACGGCGT GTCGTCGCTG
CGGTCGAGAT AG
|
|---|
| Protein sequence | MSRNIEVGVF IPVGKNGWIH SVNTPYTPGS FQHVLDVVQR SEALGFDFVL SPAIWRGRKG
PSRHWMDSLE SLTTTAALLQ ATSRIEIFGT VHMTVFPPAT IAKMIATLDQ IGAGRVGLNL
VTGSSYLDLA HLGLWNDELN HDERYDMADE WVHLVKRLWT EEIVDHKGRF FATEAATMGP
KPSRMPKLVN AGASPRGIKF AADNCDIAFI SASDGPKFIA TARQCKEAAR AMGKPNLKTF
GLVTVIPGET DAEAQARLDH FNAGVDRECL ADIAAGYEQN RSAKALSEAS LSLTGGEKQS
CVMPGELVGS YETLARRLSV TALEGELDGL MLVVPDYIED LAAIANRTLP LMERYGVSSL
RSR
|
|---|
| |