Gene Swit_4209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4209 
Symbol 
ID5196101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4637649 
End bp4638137 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID640583763 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001264687 
Protein GI148557105 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.176397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.786094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA AGCTTGACGG ATCGTGCCGC TGCGGCGCGA TCCGCTTCAC CGCCGACAGT 
CACGCGCCGG TGCCGTTCAT GCGGTGCTAT TGCTCGATAT GCCGGAAGAC CGCGGGCGGT
GGCGGCTATG CCGTCAACCT CCACGCCGAC AAGCGGACGC TGGAGGTCGA GGGCCGGACC
GCGATCTTCC ATGCCGAACT CGACGACGGT CGGGGCGGGT GCCGCGTCAG CACGGGCGAG
CGGCATTTCT GCCCCGCATG CGCCAGCGCG CTATGGGTGT TCAGCCCTGA ATATCCCGAG
CTCTTCCATC CCTTCGCATC GGCCATCGAC AGCGAACTGC CCAAGGCCCC GTCGCTCGTC
CATATGATGC TCTCCTCCAA GGCCTCCTGG GTCGAGCCCG AGATCGGTCC GCACGACCAA
TGCTTCGAGG AATATCCGGA GGATGCGCTG GAGGACTGGC ACCGGGCGCA TGGCCTCTGG
ATCGACTAG
 
Protein sequence
MPLKLDGSCR CGAIRFTADS HAPVPFMRCY CSICRKTAGG GGYAVNLHAD KRTLEVEGRT 
AIFHAELDDG RGGCRVSTGE RHFCPACASA LWVFSPEYPE LFHPFASAID SELPKAPSLV
HMMLSSKASW VEPEIGPHDQ CFEEYPEDAL EDWHRAHGLW ID