| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4172 |
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| Symbol | |
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| ID | 5196535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4589168 |
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| End bp | 4590337 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640583726 |
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| Product | aminotransferase |
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| Protein accession | YP_001264650 |
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| Protein GI | 148557068 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000308334 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.06554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGCC TCGCAAGGCG GATCACGCAG ACCAGCCCGA AAAGCTACGG CATGTCCGAC
AAGGCAGCAC CTCTCGAGGC GCAGGGGATA GACCTGATCC GCCTGGATGT CGGCCGCCCC
ATCCATGACA CACCATCCCA CATCAAGGAG GCCGCCATCG CGGCGCTACG CGCGGGGAAG
GTCCATTATA GCGAAATGCA GGGGGAATCC GCCCTGCGCG CCGCGCTGGC GTCGAAGCTG
ACCCAGTTCA ACAGGATGGC GGTGACGCCA GGAGACATCC TGATCACCAA CGGGCTCACC
CATGGCTCCT TTGCGGCCAT CATGACGCTG CTCGACGCGG GCGACGAAGC GATCCTGCTC
GATCCCCACT ACCCCCAGCA TGTGGGCAAG ATCGAAATCG CAGGCGCGCG AGCGGTGATG
GTTCCGCTCG ATGCTGCCGA CGGCTTCTCG ATCCGCGCGG ACTGGATCGA AGCGGCGATC
ACGCCCAGGA CGCGCGTCAT CGTCCTGGTA AATCCGGCCA ATCCGACCGG GCGCCCCTAC
GGCCTGCGGG AACTGGAAGC CGTCGCCGAG GTGGCCATCC GGCACGATCT CGCGGTCATC
TCGGACGAGG TCTATGAATT CGTCATTTAT GAACCGGGCC GGCACATCAG CATCGCCGCT
CTACCCGGCA TGGCGGAACG AACTGTCTCG CTCTTTGCCT TCACCAAAGC CTATGCGATG
GATGGATGGC GCCTCGGCTA TGCGGTTGCC CCTCCCGCAA TCATGCAGGG CATGATCAAG
ATTGCCACGA ACGAAGTCAC GCACGTCAAC AGCTTCATCC AATATGGCGC CCTGGAGGCC
GTCTCGAACG GCCAGGCCGC AATGGAGGCG ATGATCGAAG ACGACCGGCG GAAACGCGAC
CTGATGGTCA TGCGCCTGAA CCAGATGCCC GGCGTGCATT GCCCGGCTCC CGACGCGACC
ATATACGCGT TCCCCGATAT CCGAGCGACG GGCAAGACGT CGCAGGAACT TGCGGACCTC
CTGCTGTTCG AAGCACATGT GGTCGTCGAA GCGGGCAGCT TCTACGGCGC GACCGGCGAA
GGCCATCTGC GGCTTTGCTT CGGATCGGAG ACATATGAAC GCATCGATCA GGCGATGACC
CGAATATCGC ATCTGCTCAA CCGGATCTGA
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| Protein sequence | MTCLARRITQ TSPKSYGMSD KAAPLEAQGI DLIRLDVGRP IHDTPSHIKE AAIAALRAGK
VHYSEMQGES ALRAALASKL TQFNRMAVTP GDILITNGLT HGSFAAIMTL LDAGDEAILL
DPHYPQHVGK IEIAGARAVM VPLDAADGFS IRADWIEAAI TPRTRVIVLV NPANPTGRPY
GLRELEAVAE VAIRHDLAVI SDEVYEFVIY EPGRHISIAA LPGMAERTVS LFAFTKAYAM
DGWRLGYAVA PPAIMQGMIK IATNEVTHVN SFIQYGALEA VSNGQAAMEA MIEDDRRKRD
LMVMRLNQMP GVHCPAPDAT IYAFPDIRAT GKTSQELADL LLFEAHVVVE AGSFYGATGE
GHLRLCFGSE TYERIDQAMT RISHLLNRI
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