| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4170 |
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| Symbol | |
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| ID | 5199983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4587191 |
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| End bp | 4587853 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640583724 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001264648 |
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| Protein GI | 148557066 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0130344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.052898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTC GAAAAATCGA AAACAGCATC CTGGACCACG CCTTGGCGAT GTTCAATGAA
TTCGGCTGGT CCAGCGTGTC CACGAACCGA ATATCCACGG CGGCGGGAAT CAGCAAAGGA
CATCTTCATT ATTATTTCCC GAACAAATCG GAGATCATCG TCGCACTATA TATGCGCATG
GACAGCGAGA TGCGCCAATG GTGGCGTACC GATCGCGAGA ATTTCACGAT GGAGCATATG
GCCAGGATGT TCATCCGGCA GGTCGTCGTC ATCGAGAAAT ACAAGTTCCT GTATCGGGAT
ATCGGCAACA TCATCAGAGA CAATAAAATC CTGAAAGGCC GCTTCACCGA AGTCCGATCA
CGACGCATGA AGGAAACCGA GGCGTTCGTA AGGGAACTGG TAAACGCCGG CCTGCTCGAG
AATATCGATG TAGATCCCGT TCAGTTCGAT TATTTCATCA AGGCGACATG GGTCTTGTCC
GACTATTGGA TGACGCATGT CGATGCCAGC GGGATTCCGA CCAGAGAGGA AGCCTATCTC
GAAGGATATC ATGTGCTGAT CAACCAGTTC ATGCCCTACC TGACCGAGAG CGGAAAACGC
GCGCTCGCCG AGGTAGACCT TCGACAAATC CTACAGGAGC AGCTCGAGAA TTTTCGAGCT
TGA
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| Protein sequence | MDLRKIENSI LDHALAMFNE FGWSSVSTNR ISTAAGISKG HLHYYFPNKS EIIVALYMRM
DSEMRQWWRT DRENFTMEHM ARMFIRQVVV IEKYKFLYRD IGNIIRDNKI LKGRFTEVRS
RRMKETEAFV RELVNAGLLE NIDVDPVQFD YFIKATWVLS DYWMTHVDAS GIPTREEAYL
EGYHVLINQF MPYLTESGKR ALAEVDLRQI LQEQLENFRA
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