Gene Swit_4154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4154 
Symbol 
ID5199555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4568507 
End bp4569655 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID640583708 
Productmajor facilitator transporter 
Protein accessionYP_001264632 
Protein GI148557050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.570347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.191816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTT CCACCGCGCT GAGTCCGGCG CAGAACGTCG CCCTGATCGT GGTGAGCCCG 
CTCGCATGGC TCACGATCAC CCTGCTGCCC TATGAGGTCA CCGCGCTGGC GGTCGACTAT
CGCATGGGGC CGTCGGCGGC GGGCTGGATC GCTGCTTGCG AACTGCTTGC CCTCGCGCTC
ACCGTGGTGT CGATCAGCCC GCGCATCGTC GCGCTCGACA AGCGCCGGCT GACTCTCGCC
GGGATCGCGC TGGCGCTCCT CGCCTCGGCC GGATCGATCG TCGTCGCGGA CACGTCATGG
CTGATCCCGC TGCGGCTGTT CTTCGGGATC GGGTCGGGCC TGATCGCGGC CGCGACCAAC
GCGCTGCCGG TCTTCGCGCG CCATCCCGAG CGGACGATCG CCTGGATGCA GATCATGATC
GCGATCAACT TCGGCGTGTC GATCTATGGC GCCGGCACCC TGGCTGCGCC GGTGGGTCGC
GAGGCGACCT TCCTAGTCGA GCTGCTGCTG CTCGCGACGG TCGGCGGCGC GGGTTTCCTT
CTGTCCCCTG GCGTCGCCGC TTCCGCCGGT GCGGCCGGCG CGGGGCCGAG CCGGCTGCCG
CGCGGACTGC TGCGGGCGCT CGGCGCGCTC GCGCTGATGT ACTTGTCGCA AGCGGCGGTC
TGGGCCTATG CCGAGCAGGC GGGAACGGGC GTCGGCTTCG GTGCGGTCGA TCTCGCGCTG
CTGCTCACCA TCGCCGCTTT CACCACTCCG TTGGGCGGGT TCGCCGCCGC GGCGATGCGC
GACCGGTTCG GTCATGCGCT GCCGCTCGCG ATTGGCTTCG GCGTGCAGAT GTTCGTCGCC
TTCACCGTCT ATTGTCTGAG GTCGGTCGAG GCCTATGCGG CCGGGATCAT GGTCTTCAAC
ATGACCACCC CCTTCACGAC ATCCTATCTG ATGAGCCTGC TCGCCGGTCT CGATGAGAGC
GGGCGGGGGA CGTCGCTGGG CGGCAGCGCT ATCAATTTCG GCGCGGCGGC CGGTCCGGCG
CTGGCGGCGC TGCTGGTGGT GATGCCCAGC CGGGCGCCGA TTGGGCTGTT GTCGATCGCG
GTGTTGTCGA TCGGCCTCGC TTTGGCCCTG TCCGCGCGGC GCGAGCTGCC GGTGCCCGCC
CGGGCCTGA
 
Protein sequence
MTASTALSPA QNVALIVVSP LAWLTITLLP YEVTALAVDY RMGPSAAGWI AACELLALAL 
TVVSISPRIV ALDKRRLTLA GIALALLASA GSIVVADTSW LIPLRLFFGI GSGLIAAATN
ALPVFARHPE RTIAWMQIMI AINFGVSIYG AGTLAAPVGR EATFLVELLL LATVGGAGFL
LSPGVAASAG AAGAGPSRLP RGLLRALGAL ALMYLSQAAV WAYAEQAGTG VGFGAVDLAL
LLTIAAFTTP LGGFAAAAMR DRFGHALPLA IGFGVQMFVA FTVYCLRSVE AYAAGIMVFN
MTTPFTTSYL MSLLAGLDES GRGTSLGGSA INFGAAAGPA LAALLVVMPS RAPIGLLSIA
VLSIGLALAL SARRELPVPA RA