Gene Swit_4152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4152 
Symbol 
ID5199553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4567540 
End bp4567926 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID640583706 
Producthypothetical protein 
Protein accessionYP_001264630 
Protein GI148557048 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.507764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.274581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT TCGATCCCAG GGAGATCGAC GCCGCGGTTT CGCGCGCGTT CGAGGAAGGC 
GACATCGAAG AGGCGCTGAC GCTCTATGAG GAGGGCTGCG CCTTCGTCCG CTTCAGCGGC
GAGGTCACCA CCTCGGCGGC CGACATCCGC GCCGAGATCG GCGGCCTGAT CGCGATGAAG
CCGAAGGTGA CGCTGGACGA GGTCGCGGTG ATCGAGAGCG TCGACGGCAA GCTTGCCACC
ACCCGGGCCC GGGGGCGGAT CGACGGCACC GGGCCCGATG GTCAGCCGAT GAGCGTGCCA
TTCCACACCC TCGCGGTCGT CCGCAAGCAG GCGGACGGAA GCTGGCGCTT CGCGATCGAC
GACCCTCAGG GTAGCGCCAA ATCCTGA
 
Protein sequence
MKVFDPREID AAVSRAFEEG DIEEALTLYE EGCAFVRFSG EVTTSAADIR AEIGGLIAMK 
PKVTLDEVAV IESVDGKLAT TRARGRIDGT GPDGQPMSVP FHTLAVVRKQ ADGSWRFAID
DPQGSAKS