| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4142 |
|---|
| Symbol | |
|---|
| ID | 5199074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4551514 |
|---|
| End bp | 4552515 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640583696 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001264620 |
|---|
| Protein GI | 148557038 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGATG TGGCGGATCG CTGTGGCCTG TCCGTGGGGA CGGTGTCGCG GGTCCTCAAC
GGCAATGCTA CCGTCGCCCA GGATATTCGC CGACGGGTTG AGGTGGCGAT CGACGCGCTC
GGCTATGTTC CCAACCGGAT CGCCCAAAGT ATGCGCAAGC GCGCGACCAA CGCGGTGGGG
TGCCTCGTCA CCGACATCCG CTTGACCATC GCGGCGAACC TGGTGAGTGG CGCGGAGAGC
CGGTTGCGGG AAGCGGGCTA TGACCTGTTC CTCGCCAGCA CGCACAATGA TCCGGTCAAG
GAGGAAGGCA TCTGGCGCTT CTTCCGCGAG CGGCAGCTCG ACGCGATCAT CAGCGTGTCG
ACCGACGATC AAAGTGCAGA GCGTGCGGGG CTCCTTCAAT CGCTAAGGAT GCCGGTCGTG
CTGTGGGAGC GGGACGGTGG CGAGAATTTC GATAGCGTCC TCACCGATCA TTATAGCGGT
TGCCTCGAAG CTTGCAGCTA TCTGCTCGAT CTCGGCCATG AACGTATCGC GCTGGTAGGC
GGGCGTTCGA CGGTTTGGGC TGGCCGGGAG ATGGAGCGGG GCTATCGGGC CGCGATGGCC
CAGGCGGGGC GTGACGTCGA CCCCGCGTTG CTGTTCAGCG CCGATACCTT CACCCATGCG
GCGTGCAGCG AACTGCTGCG CGAGGAAAAT GGCGTAACCG CCATCATCGG CGTGCTCGAT
GTCATCGTGC TGATCTGCAA GGTCGCCCGC GCGGCGGGGC GAGTGATTCC GAAAAGCCTG
TCGCTGATTT CGATCGGCGA TAGCGATACG CTCAACATGA ATGCACCGGC AATCAGCGCC
ATCCGCTATG ACGCCGAGCG CCATGGGCGG ACCGCGGCCG AGTTCGTGCT CGATCGCCTG
GGGGATTCGC CGCCGGGGAA CGCCCGACGC CTCATCCTTC CGATCGAGCT CATCGTTCGG
CAGTCTTGTG GGCAGCCGGT GGCTGCGTCC GAAGCGATCT GA
|
|---|
| Protein sequence | MRDVADRCGL SVGTVSRVLN GNATVAQDIR RRVEVAIDAL GYVPNRIAQS MRKRATNAVG
CLVTDIRLTI AANLVSGAES RLREAGYDLF LASTHNDPVK EEGIWRFFRE RQLDAIISVS
TDDQSAERAG LLQSLRMPVV LWERDGGENF DSVLTDHYSG CLEACSYLLD LGHERIALVG
GRSTVWAGRE MERGYRAAMA QAGRDVDPAL LFSADTFTHA ACSELLREEN GVTAIIGVLD
VIVLICKVAR AAGRVIPKSL SLISIGDSDT LNMNAPAISA IRYDAERHGR TAAEFVLDRL
GDSPPGNARR LILPIELIVR QSCGQPVAAS EAI
|
|---|
| |