| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4121 |
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| Symbol | |
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| ID | 5198615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4523701 |
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| End bp | 4525218 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583676 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001264600 |
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| Protein GI | 148557018 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.396047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCA TCGATATCTT CGACCGGGCT GCCGGGCAGT TCGCCGACCG CGCCTGCCTG
ATCGAGGGAG AGTCGAGCCG CAGCTATGTG GAGGTGCGGG CGGACAGCTG CGCGCTGGCC
GCCTGGATCG CTCCCCGCCT CGACCGGCCG GGAAGCCGCA TCGCCGTGCT GGCGCCCAAT
GGCGCGGACG CGATCGTCGC CATCCTGGCG ATCTTCCGGC TGGGGGCGCT CTGGATACCC
GCCAATGCAA AGATGCCGGC CGACGATATC GGCGCCTTCC TGGCGACGAC GCGCTGCGAT
CTCCTGCTGG CCCATCCCGA CCTAGGGGAG GCTGCGGAAC GGGCGGCCGG CATCGCGGGA
TGCGCGGTCG CGATCCTGTC CGATCCCGGA AACCTGCGAC CCTCTCCCGC ACCGCCGGGG
GAATGGCGCA TGGACGACAT CTGCACCCTG TTCGCGACCG GCGGCACGAC CGGATCGCCC
AAGGCCGCCA TGTGGTCCCA CCGGACCTGG GCCTCGCTCT TCGCCAATTT CCACGCCGGC
ATCAGGCATG AAGGCCATGC CGTGCATCTG GCCGCGGCGC CGATCACCCA TGCGGCGGGG
GTCGTCGCCA TCTGCATGTT CGCGATCGGG GCGACGACCG TCATCATCGA CCGCGCCGAA
CCGTCGCTGG TCATGGCGTC GATCGAGCGG CATCGGGTGA CGACGCTGTT CCTGCCGCCG
ACCGCGATCT ACACGATGCT CGCGCATCCG GAGGCCCGCC GACACGATTT CTCGTCGCTC
CAGAACCTGA TCTACGCGGC AGCGCCGATG TCGGTCGGGA AGCTGCGCGA GGCGATGGAG
CTGTTCGGTC CGGTCATGGT GCAGACCTTC GGCCAGGCCG AGGCGCCGAT GCTGTGCACG
ATCCTGACCC GGGAGGATCA TGCCGACGCG GTCGCGCGCG GGGACGAGGC GAGGCTCGCG
AGCTGCGGCC GGCCGGCGCT GCTGACGCAG GTCATGATCG TCGACGACGC CGGCCGCCCC
CTTCCCGCCG GCGAGACCGG CGAGATCGCG GTGAAGGGCG ACCTGCTCAT GGCCGGCTAT
TTCGAGAATC CCGAGGCGTC GGCCGCCTGC CGCATCGGCG AGGGGTGGCA GAGGACGGGC
GATGTCGGCT TCATCGACGA CGCCGGCTTC GTCTCGATCA CCGACCGGAA GCGGGACATG
ATCATCACCG GCGGCTTCAA CGTCTTTCCA TCGGAGATAG AGCAGGTGCT CTGGAGCCAC
GACGCCGTCC AGGACTGCGC CGTCATCGGC TGCCCCGACG AGAAATGGGG CGAGGCGGTG
CTGGGGGTGG TGGAGCTCAA GCCGGGCCGC GCGTGCGGCG CGGAGGAGCT GATCGCGCTT
TGCAGGCAAC ACCTCGGCAG CATCCGCACC CCGAAGCGGA TCGACTTCTG GCCCGAACTG
CCGCGCAGCC CGGTCGGCAA GGTCCTGAAG CGCGAGATAC GCGACCATTA TTGGGGGCGC
GAGACGCGCA GGATCTGA
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| Protein sequence | MRIIDIFDRA AGQFADRACL IEGESSRSYV EVRADSCALA AWIAPRLDRP GSRIAVLAPN
GADAIVAILA IFRLGALWIP ANAKMPADDI GAFLATTRCD LLLAHPDLGE AAERAAGIAG
CAVAILSDPG NLRPSPAPPG EWRMDDICTL FATGGTTGSP KAAMWSHRTW ASLFANFHAG
IRHEGHAVHL AAAPITHAAG VVAICMFAIG ATTVIIDRAE PSLVMASIER HRVTTLFLPP
TAIYTMLAHP EARRHDFSSL QNLIYAAAPM SVGKLREAME LFGPVMVQTF GQAEAPMLCT
ILTREDHADA VARGDEARLA SCGRPALLTQ VMIVDDAGRP LPAGETGEIA VKGDLLMAGY
FENPEASAAC RIGEGWQRTG DVGFIDDAGF VSITDRKRDM IITGGFNVFP SEIEQVLWSH
DAVQDCAVIG CPDEKWGEAV LGVVELKPGR ACGAEELIAL CRQHLGSIRT PKRIDFWPEL
PRSPVGKVLK REIRDHYWGR ETRRI
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