Gene Swit_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4054 
Symbol 
ID5196411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4456763 
End bp4457287 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640583611 
ProductMarR family transcriptional regulator 
Protein accessionYP_001264536 
Protein GI148556954 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATAA TCCCGCTTGC AATACATACA GCAAGCATCC ACAATGTAAG CATGCATACA 
GAATTGAGTC GCCGCGTTTC CTTTCTGATG CACGATATCG CGCGCCAGTC CCGCTATTGG
TTCGACGCGC GCGCCCGGTC GCGCGGGCTG ACCCGCGCCC AATGGCGCGT GCTCCTCTAT
CTCGACCGCT CCGACGGCCC GACCCAGAGC GAGGTCGCGG AGATGCTCGA CGTCGAGCGG
ATCACCCTGT GCCGCATGGT CGACCGGCTA TCCGAGGGCG GGCTGGTCGA ACGGCGCGCC
GACCCCGCCG ACCGCCGCGT CTGGCGGCTC TACCTGACCG ACAAGGCCGC CCCGCTGGTC
GACGAGCTGA CCGACATCGC CAACGAGATG GAGGACAATC TGCTCGCCCC GCTCGACGCC
GGGCAGCGGG CGACGCTCAC CGACCTGCTC ACCATCGTCC GCGATCATTT CCGCGAACAG
GACGAGCGGA GCGATGCGCT GCTGGCGGCG GAGCGCCGGC AATGA
 
Protein sequence
MDIIPLAIHT ASIHNVSMHT ELSRRVSFLM HDIARQSRYW FDARARSRGL TRAQWRVLLY 
LDRSDGPTQS EVAEMLDVER ITLCRMVDRL SEGGLVERRA DPADRRVWRL YLTDKAAPLV
DELTDIANEM EDNLLAPLDA GQRATLTDLL TIVRDHFREQ DERSDALLAA ERRQ