Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4054 |
Symbol | |
ID | 5196411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4456763 |
End bp | 4457287 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583611 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001264536 |
Protein GI | 148556954 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATAA TCCCGCTTGC AATACATACA GCAAGCATCC ACAATGTAAG CATGCATACA GAATTGAGTC GCCGCGTTTC CTTTCTGATG CACGATATCG CGCGCCAGTC CCGCTATTGG TTCGACGCGC GCGCCCGGTC GCGCGGGCTG ACCCGCGCCC AATGGCGCGT GCTCCTCTAT CTCGACCGCT CCGACGGCCC GACCCAGAGC GAGGTCGCGG AGATGCTCGA CGTCGAGCGG ATCACCCTGT GCCGCATGGT CGACCGGCTA TCCGAGGGCG GGCTGGTCGA ACGGCGCGCC GACCCCGCCG ACCGCCGCGT CTGGCGGCTC TACCTGACCG ACAAGGCCGC CCCGCTGGTC GACGAGCTGA CCGACATCGC CAACGAGATG GAGGACAATC TGCTCGCCCC GCTCGACGCC GGGCAGCGGG CGACGCTCAC CGACCTGCTC ACCATCGTCC GCGATCATTT CCGCGAACAG GACGAGCGGA GCGATGCGCT GCTGGCGGCG GAGCGCCGGC AATGA
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Protein sequence | MDIIPLAIHT ASIHNVSMHT ELSRRVSFLM HDIARQSRYW FDARARSRGL TRAQWRVLLY LDRSDGPTQS EVAEMLDVER ITLCRMVDRL SEGGLVERRA DPADRRVWRL YLTDKAAPLV DELTDIANEM EDNLLAPLDA GQRATLTDLL TIVRDHFREQ DERSDALLAA ERRQ
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