Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4047 |
Symbol | |
ID | 5200869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4450377 |
End bp | 4451114 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583604 |
Product | TonB family protein |
Protein accession | YP_001264529 |
Protein GI | 148556947 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.866851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGACGA TGCACGCGAC GCTGGACAGG GATGCGGGGG CGGAGGGCCA TGCGCTCTTC TTCGCCGATC TGCCCGATTC GCCGGCGAAG GGACCGGCTC CCCTCGTCGT CGAGCGTTCG GCCTATGGCG CCGATCGCGC GCCCAACTGG CCGATGATCG CCGCGATCGT CGCGCTCCAC ATCGTCGCCT TCTACGCGCT GGTCACCTTC GACGTGATCC ATATCGCCGA GAAGAAGAAG CCGCTGGTCG TCGACCTGAT CGCCGAACCG CCGGTGCCGC CCGCCGAGAA GCCGAAGCCA GAGCCGGTGG TGGTCGAGAA GGTCCAGCCG GTCGTCGTGG CACCGCCGCC GATCGTCCAG ACGCTCGCGT CGCCGCCCCC GCCGATCACG GTCACCACCA CGCCCCCGCC GCCCCGGCCG GTCGCGGTCG CGGCGCCCCC GCCCGCCGGA CCGGTGACGG TCGGCAATCT CGACGAGCGG CTGCTCGAGG GCAGGCCACC GCGTTATCCG GTCGAATCGC GCCGCAAGCA TGAACAGGGC ACGGTCGTGG TCCGCCTGCT GATCGGCACC GACGGCCGGG TCGCGGATAT CTCGATCGCG CAGAGCAGCG GCTTCGCCCG GCTCGACCAG GCCGCGCTCC AGGCGATCCG GGGCTGGCGC TGGCAACCGA TCATCCGCGA CGGCCAGCCG GTCGAGGTGC GCGGCCTCTA CACCATGCCC TTCACGCTGA ACGGCTGA
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Protein sequence | MLTMHATLDR DAGAEGHALF FADLPDSPAK GPAPLVVERS AYGADRAPNW PMIAAIVALH IVAFYALVTF DVIHIAEKKK PLVVDLIAEP PVPPAEKPKP EPVVVEKVQP VVVAPPPIVQ TLASPPPPIT VTTTPPPPRP VAVAAPPPAG PVTVGNLDER LLEGRPPRYP VESRRKHEQG TVVVRLLIGT DGRVADISIA QSSGFARLDQ AALQAIRGWR WQPIIRDGQP VEVRGLYTMP FTLNG
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