| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4036 |
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| Symbol | |
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| ID | 5198833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4440703 |
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| End bp | 4441581 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583593 |
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| Product | PEP-CTERM locus, polysaccharide deactylase |
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| Protein accession | YP_001264518 |
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| Protein GI | 148556936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.216969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.884964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA CCAGGACGCG GCCTGATCCC AGCATGGTCA CCAACGGCCT GTCGGTCGAT
ATCGAGGACT GGTTCCAGGT CGGCGCCTTC GAACGGACCA TCCGCCGCGA GGACTGGGAC
GCGCTGACCC CGCGGGTCGA GCGCAACAGC GACGCGGTGA TCGACCTGTT CGGCCGGATG
GGCGCCAGGG CGACCTTCTT CACGCTGGGC TGGGTCGCCG AGCGCTATCC CGCGTTGATC
CGCCGCATCG TCGACGCCGG GCACGAGCTG GCCAGCCATG GCTGGGACCA TCTCCGCGTC
TTCACGATGA CGCCCGCGCA GTTCCGCGAG GACCTGCGCC GCACCCGCGC GGTGCTGGAG
GACCTGTCGG GGCGGAAGGT GACCGGCTAT CGCGCGCCGA GCTTCTCGAT CGACGAGCGC
ACCCCCTGGG CGCACGAGAT CCTCGCCGAG GAGGGCTATG CCTATTCGTC GAGCGTCGCG
CCGGTCGTCC ATGACCATTA TGGCTGGCCC GAGGCGCCGC GCTTCGCCTT CCGGCCGGTT
GCGGGCAGCG CGCTGGTCGA GCTGCCGGTG ACGACCGCCC GGCTCGGTCG CCGCATCGTC
GCCGCCGGCG GGGGTGGCTT CTTCCGCCTG TTCCCCTATG CCTTCTCGCG CTGGGCGATC
CGCCAGGTCA ACGGCGAGCG GCAGCCCGCC ATCTTCTATT TCCACCCGTG GGAGATCGAC
CCCGGCCAGC CGAGGGTCGC CGACGCGCCG TTCAAGTCGA AGCTGCGCCA TTATGCGCGG
CTCGGCGCGA TGGAGGGCAA GCTCGAACGG GTGATCCGCG ACTTCCGCTG GGACCGGATC
GACCATCTGG TCGCCGCCGA AGCGGCCAAG GGCGGCTGA
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| Protein sequence | MAATRTRPDP SMVTNGLSVD IEDWFQVGAF ERTIRREDWD ALTPRVERNS DAVIDLFGRM
GARATFFTLG WVAERYPALI RRIVDAGHEL ASHGWDHLRV FTMTPAQFRE DLRRTRAVLE
DLSGRKVTGY RAPSFSIDER TPWAHEILAE EGYAYSSSVA PVVHDHYGWP EAPRFAFRPV
AGSALVELPV TTARLGRRIV AAGGGGFFRL FPYAFSRWAI RQVNGERQPA IFYFHPWEID
PGQPRVADAP FKSKLRHYAR LGAMEGKLER VIRDFRWDRI DHLVAAEAAK GG
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