Gene Swit_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4012 
Symbol 
ID5197068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4412789 
End bp4413826 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID640583570 
Productmethyltransferase type 12 
Protein accessionYP_001264495 
Protein GI148556913 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGTC GGGATGACGT GATCGACGGC TATCGCGAGA TATTGGGCCG GGAACCGGAA 
AACGACCTGG TGATCGACCA TCACCGGCAT TTCGAGACAC GGACCGACCT TTTTGCGGCA
CTGCTCCAAT CGGACGAATT CCGGGGCGGG TTCCGGACAC GCTTCACGTC GGAAAAGGCG
ATCACCCTCG ACATGCTGGA CGAGGTGGCG CTCGACTTCG AGAAGGGCAA TCACGACCGC
TGGCGAGGCC ATTCGCTGAG CCTGCCCGAT TGGTTCGACC CGACCCTCGA TCCCTGGGGC
ACCGCCTATC GGGACCAGAT GCTGAAGCTG TGGGAGGCGA TCACCAACCG GTCGGACTAC
CAGCCGGCCA GCAACGAGGA TACGCCCGAG ATCGCCGATC TGGACGCGAC CTTCCGTCCC
GCCTTCTATG CGTCGGGCGA TACAAGGTTC GCGGGCGGCC AGCTCATGGC GATGGGCCAT
ATCCTGATGC GCAGCGACAT CGCCGCCGGG CAGCGGGTGC TCGAATATGG CGCCGGTTTC
GGCCTGACCG CCCTCTCCTT CGGCAGGCTC GGCGCGAAGG TGGACACGGT CGACATCAAT
CCCGCCTTCT GCCGGGCCGT GCAGACCGCA GCGGATCGCT ACCAGGTCGA CCTGACGCCG
CACGTCGGGG AGTTCGGCTT CAACCCGGCC GGCATTCCCA ATGCCTACGA CCTGATCTTC
TTCTACGAGA GTTTCCACCA CGCGCTGGAT TTCGCGCCGC TGCTCCCACG CCTGCGGGAT
CTCCTGACCC CGACCGGCAA GGTCATCCTC GCCGGGGAAC CCATCTTCGA CGCGCTCTGT
TCCGACCTGC CCTATCTATG GGGATTCCGG CTCGACTGGG AGAATGTCGC CGTGATGCGG
ATTCGCGGCT GGCTCGAACT CGGCTTCCAG AAGAATTTCC TGATCGGCGA GTTCGCGCGG
GCGGGGTTCG AATGTGCAGA GCATCGCGAC CCCAATTCCC ATTGGGCGCA GGTCTACGAG
TTCCGGCAGC GGGGCTGA
 
Protein sequence
MISRDDVIDG YREILGREPE NDLVIDHHRH FETRTDLFAA LLQSDEFRGG FRTRFTSEKA 
ITLDMLDEVA LDFEKGNHDR WRGHSLSLPD WFDPTLDPWG TAYRDQMLKL WEAITNRSDY
QPASNEDTPE IADLDATFRP AFYASGDTRF AGGQLMAMGH ILMRSDIAAG QRVLEYGAGF
GLTALSFGRL GAKVDTVDIN PAFCRAVQTA ADRYQVDLTP HVGEFGFNPA GIPNAYDLIF
FYESFHHALD FAPLLPRLRD LLTPTGKVIL AGEPIFDALC SDLPYLWGFR LDWENVAVMR
IRGWLELGFQ KNFLIGEFAR AGFECAEHRD PNSHWAQVYE FRQRG