| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3973 |
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| Symbol | |
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| ID | 5199584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4361197 |
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| End bp | 4361952 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640583529 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001264456 |
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| Protein GI | 148556874 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.323006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.293955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTG AACCCGTCAC CGAAGCCGAG ATCCAGGCCT ATCTGGACGG CGAGCTCGAT
CTTGGCCGCC GGCTCGAGGT GGAGAGCCAT CTCGCCGCCG ATCCGGAGGC CGCCCATGTC
TTCATGGAGG ATTTGCGCCT TCGAACCTCG CTGCGCCTGC TGGCCACCGA CCTCGGCGAC
GCGCCGCCGG AGATGCTGTC CGCCGCCGCC CGGCTGTCGG CCCGGCTGGG CGACGGGGCG
CCGCGCAGCT TCCGCAACCT GTGGGGCGGC CGGGCGATGC AGGGGCTTGC GGCTGCGGCG
CTGATCGCGA TCGTGGTGCT GCCCGGGCGC GACGTCCAGG CCGGTCCGCC CGCTTATGTC
GGCGACGCCG TCGCGGCCTA TCGCACCGGC CTGCTGCGCG AGGCGATGGT CTCGCAGGTC
GAGACGCCGC GCTTCGACGC CGGCGAGGTC CAGCGCAACA CCCAGATCCG CGTGCCGCGG
CTGCCGGCCC AGTGGGTCGT GACCGACGCG CAGATATTCC CGTCGAAGGA GGGGCCGGCG
TTGCAGCTCA TGGTGCGGAC GCCCAATGCC AAGAAGCTGT CGCTGTTCGC CGTCCGGGCC
CCGAGCGACG CGCCCATGGC GCCGACCGCC GTGCGGCACG AGGGCGCATC GGTCGCCTAT
TGGCGCGAGG GCGAGATGTC CTACGCGATC ACCGGCCCCG AGGAGCCCGA GACGATCGAC
ACGGTGGCCG AGAATTTCGT CGACGAAGCG GTCTGA
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| Protein sequence | MHPEPVTEAE IQAYLDGELD LGRRLEVESH LAADPEAAHV FMEDLRLRTS LRLLATDLGD
APPEMLSAAA RLSARLGDGA PRSFRNLWGG RAMQGLAAAA LIAIVVLPGR DVQAGPPAYV
GDAVAAYRTG LLREAMVSQV ETPRFDAGEV QRNTQIRVPR LPAQWVVTDA QIFPSKEGPA
LQLMVRTPNA KKLSLFAVRA PSDAPMAPTA VRHEGASVAY WREGEMSYAI TGPEEPETID
TVAENFVDEA V
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