Gene Swit_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3956 
Symbol 
ID5199974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4344071 
End bp4344598 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID640583512 
Producthypothetical protein 
Protein accessionYP_001264439 
Protein GI148556857 
COG category[S] Function unknown 
COG ID[COG2001] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00242] mraZ protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.946432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGG GTGGTGCGGT CTTCAATGAC GTTCATTTGA ACGGCGTGGA CCTTAAGGGG 
CGCGTTTCGC TCCCTGCTGC CTTCCGTCAG ACGATCGACA TCCGCTCGGG CTCGCCCAAG
GTCGCCTCGG GCCTCGGCCG CACCCTGCGC ATGACCTTCA ACGCCGCGCT CAAGTGCATC
GAGGTCAGCG ACGGCCTGCA GATCGCCGAG ACCGAGGAGC AGATGAACGC CCACGCCGTC
CGCGTCTCCG AGCAGACCGG CGAGCTGGTG GGCGACGTGC TCGACCGGCT GGAGGCCGAG
ACCTATCCGC TGATGAAGGA CGTCAACTTC GACACGGCGG GCCGAATGGT CCTGCCCGAC
CGGCTGCGCG CCAAGGCGCA GATCGGCAAT GACGCCTTCT TCGTCGGCCG TGGCCGGCGT
TTCCGCATCT GGAGTCCCGA GGTGCTGCGC GCGGTCGCCG GCGGCGAATC CGGCGACGTG
CTCGAGGAGA TGGAAGACCT CCTCGCCAAG CGGAAGGAGC GCGGATGA
 
Protein sequence
MAAGGAVFND VHLNGVDLKG RVSLPAAFRQ TIDIRSGSPK VASGLGRTLR MTFNAALKCI 
EVSDGLQIAE TEEQMNAHAV RVSEQTGELV GDVLDRLEAE TYPLMKDVNF DTAGRMVLPD
RLRAKAQIGN DAFFVGRGRR FRIWSPEVLR AVAGGESGDV LEEMEDLLAK RKERG