Gene Swit_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3935 
SymbolargS 
ID5199806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4318494 
End bp4320224 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content70% 
IMG OID640583491 
Productarginyl-tRNA synthetase 
Protein accessionYP_001264418 
Protein GI148556836 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCACGC TCTATGCCAG CTTCGCCGAC CGGATCGGCG CCATCCTCGA CGACCTCCAG 
GCCAGCGGCG CGCTGCCCGC CGGCCTCGAT CGACGGAATG TCGCGGTCGA GCCGCCGCGC
GATCCCGCGC ATGGCGACCT CGCCACCAAC GCGGCGATGG TGCTGGCCAA GCCCGCCGGC
ACCAATCCGC GCGCGCTGGC CGAACTGATC GTGCCGAAGC TCGCCGCGCT GCCCGAGATC
GCGAGCGCCG AGGTGGCCGG CCCCGGCTTC ATCAACGTCC GCCTGACCGA GCAGAGCTGG
CGCGACGAGC TGGCCGGCAT CCTCTCCTCG GGCGGCGACT ATGGCCGCAC CGCCACCGGC
CGGGGCACGC GGGTCAACGT CGAATATGTC TCGGCCAACC CGACCGGGCC GATGCACATG
GGCCATTGCC GCGGCGCCGT CGTCGGCGAC GCGCTCGCCG CGCTGCTGGA GTTCGCCGGC
TATGCCGTCA CCCGCGAATA TTATGTCAAC GACGCCGGCG CGCAGGTGCA GACGCTCGCC
CGCTCGGCGC ACCTGCGCTA CCGCGAGGCG CTGGGCGAGA CGATCGAGAT TCCCGAGGGC
TTCTATCCGG GCGACTATCT GATCCCGATC GGCCAGGCGC TCGCCGCCGA GTTCGGCGAC
GCCTATGTCG GCAAGCCCGA GAGCGCGTGG CTCGACCTGT TCCGCGAGAA GACGGTCGCG
GCGATGATGG ACATGATCCG CGCCGACCTG GCGCTGCTCG GCATCGAGCA TGAGGTCTTC
GCGTCCGAGG CCGCCGTCCA GAAGGCCGGC AAGGTCGACG TCGCGCTCGA TCGGCTGCGC
GGCGAGGGGC TGGTCTACGA AGGCACGCTC GAACCGCCCA AGGGCGAGCT TCCCGACGAC
TGGGAACCGA CCGAGATGAC GCTGTTCAAG GCGACCGCCT TCGGCGACGA CAGCGACCGG
CCGGTCCGCA AGTCGGACGG CGGGCTGACC TATTTCGGCA CCGACCTCGC CTATCATGCG
CAGAAGGCCG AGACGGCCGA CATGCTGATC GACATCTGGG GCGCCGACCA TGCCGGCACC
GTCAAGCGGA TCAAGGCCGC CGTCCAGGCG CTGACCGGCG GCAAGGTCGC GTTCGACGTC
AAGCTGGTCC AGATGGTCCG CCTGCTGCGC GGCGGCGAGC CGGTGAAGAT GTCGAAGCGC
TCGGGCAGCT TCGTGACGCT GGCCGACGTG GTGCGCGAGG TGGGCAAGGA CGTCGTCCGC
TTCACCATGC TGACCCGCAA GGCCGACGCG CAGATGGACT TCGACTTCGC CAAGGTGGTC
GAGGCGTCGA AGGACAATCC GGTCTTCTAC GTCCAGTACG CCCATGCGCG GGGCCGCTCG
CTGCACCGGC GCGCGGCCGA GGCGGGGATC GACCTGGCCC CGGCGGCGGA CCTTTCCCTG
CTCGACGCCG AGGAGCTGGC GCTGGTCAAG CTCGCCGCGC AATTCCCCCG GATCGTCGAG
GGCGCGGCGC AGGCGCACGA GCCGCATCGC ATCGCCTTCT ACCTCTATGA CCTGGCGGCG
ATGTTCCATG CGCTGTGGAA CCGGGGCAAC GACGACCCGG CCCGTCGCTT CCTGCTCTCC
GACAAGCCCG AAATCACGCG CGCCCGTCTG GCGCTCAGCG ATGCGATCGG GCAGATTATC
CGCAATGGTC TCGGCGTCAT GGGCGTCACC GCTGCGGAGG AGATGCAGTA A
 
Protein sequence
MTTLYASFAD RIGAILDDLQ ASGALPAGLD RRNVAVEPPR DPAHGDLATN AAMVLAKPAG 
TNPRALAELI VPKLAALPEI ASAEVAGPGF INVRLTEQSW RDELAGILSS GGDYGRTATG
RGTRVNVEYV SANPTGPMHM GHCRGAVVGD ALAALLEFAG YAVTREYYVN DAGAQVQTLA
RSAHLRYREA LGETIEIPEG FYPGDYLIPI GQALAAEFGD AYVGKPESAW LDLFREKTVA
AMMDMIRADL ALLGIEHEVF ASEAAVQKAG KVDVALDRLR GEGLVYEGTL EPPKGELPDD
WEPTEMTLFK ATAFGDDSDR PVRKSDGGLT YFGTDLAYHA QKAETADMLI DIWGADHAGT
VKRIKAAVQA LTGGKVAFDV KLVQMVRLLR GGEPVKMSKR SGSFVTLADV VREVGKDVVR
FTMLTRKADA QMDFDFAKVV EASKDNPVFY VQYAHARGRS LHRRAAEAGI DLAPAADLSL
LDAEELALVK LAAQFPRIVE GAAQAHEPHR IAFYLYDLAA MFHALWNRGN DDPARRFLLS
DKPEITRARL ALSDAIGQII RNGLGVMGVT AAEEMQ