Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3907 |
Symbol | |
ID | 5199563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4292306 |
End bp | 4293136 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640583463 |
Product | fatty acid hydroxylase |
Protein accession | YP_001264390 |
Protein GI | 148556808 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.544374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCAATTC AGACCGCGAT CCCATATGGG CCCCGGGTCG GGGCGGTTTT CGAATTCGAG GTTTGCGTGA AGCTGTCGGC CATCAAGCCC GCCTTCTGGG CGAAGGATCA TCATCTCGAC CGCATGACGC TGCGGGAGCT GTGGATCGCC TATTTCCAAT ATCCGGCGAT CATCGGCTAT CTGCTGTGCG CCGCGATCGC GATCGGGCTG TTCTTCCGCT ATCCGGCGCC GGTGCTGCCG ACGGCGGTGG CGATCGCCGT CTCGGTCTTC GTCTATCCGC TGGTCTGGTA CTGCCTGCAC CGTTGGGTGC TGCACAGCCG CTGGATGTTC AAGGTGCCCT TCCTGGCGGC GACCTGGAAG CGCATCCATT ATGATCATCA CCAGGACCCG AACCGGCTCG AGATCCTGTT CGGCGCGCTC CACACCACCC TGCCGACGAT CGCGCTCGCG ACCGCCCCGA TCGGCTATCT GATCGGCGGC CCCGGCGCCG CGCTGGCGGC CTTCGCGACT GGCCTGATCA CGACCTGCGT CTACGAATTC TTCCACTGCA TCCAGCACCT CGCCTACAAG CCGAAGCGCA AGTGGGTGAT GGAGATGAAG GCGCGCCACA TGGCCCATCA TTTCCATGAC GAGCGCGGCA ATTACGGCAT CACCAACTAT TTCTGGGACA AGCTCTTCCG CACCTATTAC GAGCGGATCG ACAAGGACAA GAAGAGCGAG ACGGTGTTCA ACCTCGGCTA TACGCCCGAG GTGGCGGAGC GTTATCCCTG GGTGGCGCGC CTGTCGGGCG GGGTCGCCGT CGGCCATCCG AGCCAGCGCA TCCCGCACTG A
|
Protein sequence | MPIQTAIPYG PRVGAVFEFE VCVKLSAIKP AFWAKDHHLD RMTLRELWIA YFQYPAIIGY LLCAAIAIGL FFRYPAPVLP TAVAIAVSVF VYPLVWYCLH RWVLHSRWMF KVPFLAATWK RIHYDHHQDP NRLEILFGAL HTTLPTIALA TAPIGYLIGG PGAALAAFAT GLITTCVYEF FHCIQHLAYK PKRKWVMEMK ARHMAHHFHD ERGNYGITNY FWDKLFRTYY ERIDKDKKSE TVFNLGYTPE VAERYPWVAR LSGGVAVGHP SQRIPH
|
| |