Gene Swit_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3907 
Symbol 
ID5199563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4292306 
End bp4293136 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID640583463 
Productfatty acid hydroxylase 
Protein accessionYP_001264390 
Protein GI148556808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.544374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAATTC AGACCGCGAT CCCATATGGG CCCCGGGTCG GGGCGGTTTT CGAATTCGAG 
GTTTGCGTGA AGCTGTCGGC CATCAAGCCC GCCTTCTGGG CGAAGGATCA TCATCTCGAC
CGCATGACGC TGCGGGAGCT GTGGATCGCC TATTTCCAAT ATCCGGCGAT CATCGGCTAT
CTGCTGTGCG CCGCGATCGC GATCGGGCTG TTCTTCCGCT ATCCGGCGCC GGTGCTGCCG
ACGGCGGTGG CGATCGCCGT CTCGGTCTTC GTCTATCCGC TGGTCTGGTA CTGCCTGCAC
CGTTGGGTGC TGCACAGCCG CTGGATGTTC AAGGTGCCCT TCCTGGCGGC GACCTGGAAG
CGCATCCATT ATGATCATCA CCAGGACCCG AACCGGCTCG AGATCCTGTT CGGCGCGCTC
CACACCACCC TGCCGACGAT CGCGCTCGCG ACCGCCCCGA TCGGCTATCT GATCGGCGGC
CCCGGCGCCG CGCTGGCGGC CTTCGCGACT GGCCTGATCA CGACCTGCGT CTACGAATTC
TTCCACTGCA TCCAGCACCT CGCCTACAAG CCGAAGCGCA AGTGGGTGAT GGAGATGAAG
GCGCGCCACA TGGCCCATCA TTTCCATGAC GAGCGCGGCA ATTACGGCAT CACCAACTAT
TTCTGGGACA AGCTCTTCCG CACCTATTAC GAGCGGATCG ACAAGGACAA GAAGAGCGAG
ACGGTGTTCA ACCTCGGCTA TACGCCCGAG GTGGCGGAGC GTTATCCCTG GGTGGCGCGC
CTGTCGGGCG GGGTCGCCGT CGGCCATCCG AGCCAGCGCA TCCCGCACTG A
 
Protein sequence
MPIQTAIPYG PRVGAVFEFE VCVKLSAIKP AFWAKDHHLD RMTLRELWIA YFQYPAIIGY 
LLCAAIAIGL FFRYPAPVLP TAVAIAVSVF VYPLVWYCLH RWVLHSRWMF KVPFLAATWK
RIHYDHHQDP NRLEILFGAL HTTLPTIALA TAPIGYLIGG PGAALAAFAT GLITTCVYEF
FHCIQHLAYK PKRKWVMEMK ARHMAHHFHD ERGNYGITNY FWDKLFRTYY ERIDKDKKSE
TVFNLGYTPE VAERYPWVAR LSGGVAVGHP SQRIPH