Gene Swit_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3896 
Symbol 
ID5199994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4281063 
End bp4282205 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content73% 
IMG OID640583452 
Productgamma-glutamyl kinase 
Protein accessionYP_001264379 
Protein GI148556797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCG ATCTGACCCC GGCCGCTTCC CGCTTCACCC CCGCTGCCTG TCCCCGCCTG 
GTCGTCAAGA TCGGGTCGGC GCTGCTCGTC GATCCCGACG GCAGGGTCCG GCGCGACTGG
CTGCAGGGCG TCGTCGCCGA CATCGCCGAG CGGCACCGCG CGGGGCAGCG GATCGCGGTC
GTCTCCTCGG GCGCGATCGC GCTCGGCGCG CGGCGGCTGG CGCTGCCCAA GGGGGGGCGC
GCCAGCCTGG AGGATGCACA GGCCGCCGCC GCGACCGGGC AGATCGCGCT GTCGCACTGC
TGGGCCGAGC TGCTCCATGC CGAAGGGCTC ACCGCCGCGC AGATCCTCGT CACGCTCGAC
GACCTCGAGG ATCGCCGCCG CTACCTGAAC GCGGCGTCGA CACTCCACCG GCTGCTCGGC
CTCGGCGTGG TGCCGGTGAT CAACGAGAAT GATTCGGTCG CCACGGCGGA GATCCGCTTC
GGCGACAACG ACCGGCTCGC CGCGCGGATC GGCCAGGCCG CCGACGCGGG CGGGGTGATC
CTGCTGTCCG ACATCGACGG GCTCTACACC GCCAATCCGC ATCGCGACCC GACCGCGCGG
CTGGTGCCCG AGGTGGCGCG GATCGACGCG CGCATCCGCG CGATGGCCGA TGCCGATTCG
GCCTCCGGCA TGGGATCGGG CGGGATGATC TCGAAGCTGG AGGCGGCGCG CATCGCGCAG
CGCTCCGGCG CGCATCTCGC GATCATCACC GGCAAGCGCG ATCACCCGCT GGCGGCGTTC
GACGCCGACC ATCGCGGCAC CGTCTTCCTC GGGGAGAAGA TCGGCACCGC GCGCAAGGCC
TGGCTCGCCG GACGGCTGAC CGCCAAGGGC CGGATCGTCG TCGATGCCGG CGCGGTCGGC
GCGCTGGCGC AGGGGCGCAG CCTGCTCGCC GCCGGGGCGG TCCGGGTCGA GGGGCGCTTC
GCGCGCGGCG ACGTGGTCGA CATCGTCGCG CCGGACGGCC AAGCGATCGC GCGCGGCCTG
ATCGAATATG ACGCGGTCGA CGCCGCCAAG ATCGTCGGCC GGCGCAGCAA CGCCCACGAA
CAGATCCTCG GCTATGCGCC GCGTTCGGCG CTGGTCCACC GCGACCATAT GGTCCTGCTG
TGA
 
Protein sequence
MVADLTPAAS RFTPAACPRL VVKIGSALLV DPDGRVRRDW LQGVVADIAE RHRAGQRIAV 
VSSGAIALGA RRLALPKGGR ASLEDAQAAA ATGQIALSHC WAELLHAEGL TAAQILVTLD
DLEDRRRYLN AASTLHRLLG LGVVPVINEN DSVATAEIRF GDNDRLAARI GQAADAGGVI
LLSDIDGLYT ANPHRDPTAR LVPEVARIDA RIRAMADADS ASGMGSGGMI SKLEAARIAQ
RSGAHLAIIT GKRDHPLAAF DADHRGTVFL GEKIGTARKA WLAGRLTAKG RIVVDAGAVG
ALAQGRSLLA AGAVRVEGRF ARGDVVDIVA PDGQAIARGL IEYDAVDAAK IVGRRSNAHE
QILGYAPRSA LVHRDHMVLL