Gene Swit_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3893 
Symbol 
ID5196216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4278719 
End bp4279291 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content71% 
IMG OID640583449 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001264376 
Protein GI148556794 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.430591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCGC GTACCCAGCG GCTTTTGTTG CGTCCCGGCT GGAAGGAAGA TGCGCCCGCG 
CTCGCCGCGG CGATCAATGA TTTTTCGGTG GTCGGCAAGC TCGCCCGCGC GCCCTGGCCC
TATCGCCAGG AGGATGCCGA GGCGTTCCTG GCGGCCGATC GCGGCCCGCT GCCCGATTTC
CTGATGTTCG CCCGCACCCA TGGCGCGCCG CGCCTGGTCG GCGGCATCGG CCTGTCCGAA
TGCGACGATG GCGTCGAGCT CGGCTATTGG ATCGCCCGGC CCTATTGGGG CCTGGGCTTC
GCGACCGAGG CCGGCCGCGC GGTCGTCGAT CTGGCCGACC GCGGGCTACG GCTGCCGCGG
CTGATCGCGG GGCATTTCGC CGACAATCCC TCCTCGGCGC GGGTGCTCCA GAAGCTCGGC
TTCGCCGCCG CCGGCACGGT CAGCAACCGG GCTTGCCGCG CGCGCAACTC GGTCGAGCGC
TGCATCGACT ATGTCCGGCC GGCCTTCGCC CGGTCCCGTC CGGCCCCGGC GCACGGGATC
GGCTATGACC GCGAGGATGC GATCGCCGCA TAA
 
Protein sequence
MFARTQRLLL RPGWKEDAPA LAAAINDFSV VGKLARAPWP YRQEDAEAFL AADRGPLPDF 
LMFARTHGAP RLVGGIGLSE CDDGVELGYW IARPYWGLGF ATEAGRAVVD LADRGLRLPR
LIAGHFADNP SSARVLQKLG FAAAGTVSNR ACRARNSVER CIDYVRPAFA RSRPAPAHGI
GYDREDAIAA