| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3888 |
|---|
| Symbol | |
|---|
| ID | 5200288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4276366 |
|---|
| End bp | 4276635 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640583443 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264371 |
|---|
| Protein GI | 148556789 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4691] Plasmid stability protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.514707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGC TAGCAATGCC TGCCGTCACC ATCCGCAATC TCTCCGAAGA GGCGCATCGC
GCGCTCAAGA TTCGGGCCGC CCACCATGGC CGCAGCACCG AGGCGGAGAT GCGCGATATC
CTGGAAGGCG CGGTTCGCCC GGCGAATCGC GTCCGTATCG GCAGCGCGCT GTCCCGGTTG
AGCCGCGATG CCGGGCTGAC CAATGCCGAT TTCGAGGCTC TCGATCAGGC TCGCGACCGC
AAGCCCGCCG AACCGCTGGG CTTCGAATGA
|
|---|
| Protein sequence | MDLLAMPAVT IRNLSEEAHR ALKIRAAHHG RSTEAEMRDI LEGAVRPANR VRIGSALSRL
SRDAGLTNAD FEALDQARDR KPAEPLGFE
|
|---|
| |