| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3849 |
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| Symbol | |
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| ID | 5197175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4232080 |
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| End bp | 4233462 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583404 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001264332 |
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| Protein GI | 148556750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.123819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCG TTGCCCTATC GACCCGCCGG CTCGGCCGGA TGCTGCGGGC GCTGCTGGTC
GCGTCGCTCG CGCTGGCGCT CACGGCCCAG CCGGTCATGG CCCAGTCGAT CCTGCGCGAC
GCCGAGACCG AGGCCTATCT CAAGGAAATC TCCGCGCCGA TCGTCGCGGC GGCCGGGCTC
CAGCCCGGCA ATGTCGACAT CGTCCTGGTC GGCGACAAGG AGATCAACGC CTTTGTCGCC
GGCGGCCAGG CGGTCTACAT CCATAGCGGC CTGATCGAGG CCGCCGACAA CACCAACGAG
ATCCAGGGCG TGATCGCCCA TGAGATCGGC CATATCACCG GCGGCCATGT CATCCGCTTC
GGCGAGGGCG CGCGTGGCGC GACCGGCATC ACCCTGCTGT CGCTGCTGCT CGGCGCGGCG
GCGATGGCGG CGGGTTCCGC CGAGGCGGGC ATGGGCGTGA TGATGGCGGG GCAGCAGGCC
GCGCTCGGCA AGTTCCTCGC GTTCAACCGG GTGCAGGAAT CGAGCGCCGA TGCCGCGGGC
GTCGGCTTCC TCAACAAGGC CGGCATCTCG GGCAAGGGCA TGCTCAGCTT CTTCCTGAAG
CTGCGCAAGG AGGAGTATCG CTACGCCTCG ACCTATGCCG AGGTCGACCC GTTCATGCAG
ACCCACCCGA TGTCGGGCGA GCGCGAGGCG ACGCTGACCG GCGACGTGAT GAAGTCGCCG
GCTTATGAGA ACAAGACCGA TCCCGCGCTC GACGCGAAGT TCAAGCGCAT CAAGGCCAAG
CTGATCGGCT ATATGGACGA TCCGACCACG GCGCTGCGCA AATATCCCGA AAGCGACCAG
AGCGCCGCCG CCCACTATGC GCGTGCCTAT GCCTGGCATC GCGGCGCCTA TCCCGACAAG
GCGGTCGAGG AGGTCGAGAA GCTCGTCGCC TCCGATCCCA AGGACCCCTA TTTCCGCGAG
CTTCAGGGCC AGATACTGCT CGAATCGGGC AAGCCGAAGG AGGCGATCGG GCCGCTCAGG
ATCGCGGTGC AGGGATCGCG CTCCTCGCCG TTGATCTCGT CGCTGCTCGG CCATGCGCTG
CTCGCCACCG AGGACCCCGC GCTGGTGCCG GAGGCGCGCG ACGTGCTCAA GGTCGCGGTC
GCGCGCGATC GCGACAACCC CTTCGCCTGG TACACGCTCG GCATGGCCTA TTCGCGGCTG
GGCGACGAGC CGCGCGCGCA GCTCGCCACG GCGGAGCGCT ATGCGCTGCT CGGCAATGAC
CGGCTGGCGA TGGCCAGCGC CGAGGCGGCG ATGTCCCGCA TCCCGCGCGG GACGCCCGAC
TATATCCGGG CGGAGGATAT CGCCTTGTCG GCACGGGCCG CGGCAAGCCA ACGGAAGAAA
TGA
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| Protein sequence | MSLVALSTRR LGRMLRALLV ASLALALTAQ PVMAQSILRD AETEAYLKEI SAPIVAAAGL
QPGNVDIVLV GDKEINAFVA GGQAVYIHSG LIEAADNTNE IQGVIAHEIG HITGGHVIRF
GEGARGATGI TLLSLLLGAA AMAAGSAEAG MGVMMAGQQA ALGKFLAFNR VQESSADAAG
VGFLNKAGIS GKGMLSFFLK LRKEEYRYAS TYAEVDPFMQ THPMSGEREA TLTGDVMKSP
AYENKTDPAL DAKFKRIKAK LIGYMDDPTT ALRKYPESDQ SAAAHYARAY AWHRGAYPDK
AVEEVEKLVA SDPKDPYFRE LQGQILLESG KPKEAIGPLR IAVQGSRSSP LISSLLGHAL
LATEDPALVP EARDVLKVAV ARDRDNPFAW YTLGMAYSRL GDEPRAQLAT AERYALLGND
RLAMASAEAA MSRIPRGTPD YIRAEDIALS ARAAASQRKK
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