Gene Swit_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3832 
Symbol 
ID5198209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4207814 
End bp4208386 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content75% 
IMG OID640583387 
ProductSmr protein/MutS2 
Protein accessionYP_001264315 
Protein GI148556733 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.334235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0950687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGC GGCTCGATCC TGACGAAGCC GCGCTCTGGC AGCGCGTGAC CGCGACGGTC 
CGGCCGATCG CCCGCAGGAC ATCCAAGCCA TCTTCCGCCG ATAGCGGGGC CGGCAATGCG
CCGGTTCCAC CGCCGCCGTC CGCCGCGAAG AAGGGGCGCG TGCCGCCGCT GCGCGTGCCG
GCGGCGACGC CCGTCACCCA GCAGAAGCCG CTCGCCGACA GCCTCGACGG CGGCTGGGAC
CGGCGGCTGC GGCGCGGCGT GACCCAGCCC GACTGGACGA TCGACCTGCA CGGCCACACG
CTCGACAGCG CCCAGCGCCT GCTCGACCGG GTGCTCGACC AGGCGGTGGC GGAGGGCATC
CGCGTCCTGT TGCTGATCAC CGGCAAGCCG CCGCGCGACG ACGATCGCGG GCTCGACGGC
CGGCCGCGCC GGGGACTGAT CCGCGCGTCG ATCGGAAGCT GGCTGCAAAG CTCGCGCCAC
GCCGTCCGCA TCGCCGCCGT CCGCAACGCG CACCCGCGCC ATGGCGGCAC GGGCGCGCTC
TACCTGATCC TCCGCCGCGA CCGGAAGGCT TAG
 
Protein sequence
MTRRLDPDEA ALWQRVTATV RPIARRTSKP SSADSGAGNA PVPPPPSAAK KGRVPPLRVP 
AATPVTQQKP LADSLDGGWD RRLRRGVTQP DWTIDLHGHT LDSAQRLLDR VLDQAVAEGI
RVLLLITGKP PRDDDRGLDG RPRRGLIRAS IGSWLQSSRH AVRIAAVRNA HPRHGGTGAL
YLILRRDRKA