| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3825 |
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| Symbol | |
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| ID | 5199231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4197856 |
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| End bp | 4199634 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640583380 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_001264308 |
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| Protein GI | 148556726 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.188675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0366246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGTAA CTTTGTGCAT TAGTGCGTGT TGCGCGGGGG ACGGCTTCGA CTATGGTGCG
CGCGCCATCA GGGGAGACAC CGTCCTTCAT GCCGTCCACG ACCACCATCC TGCTGCTGAT
CGGGGCGTAT CTGCTGGGTT CGATTCCGTT CGGGGTCGTG CTGACGCGGC TCGGCGGCGC
CGGCGACCTG CGCCAGATCG GCTCGGGCAA TATCGGCGCG ACCAACGTCC TGCGCACCGG
CCGCAAGGGG CTGGCGGCGG CGACGCTGCT GCTCGATGGT GGCAAGGGCG CGGCGGCGGT
GCTGATCGCG CAGATGGTGC AGCCCGACAT GGCGCTGTGG GCGGGCGCGG CGGCGTTCAT
CGGCCATCTC TATCCGGTCT GGCTGAAGTT CAACGGCGGC AAGGGGGTGG CGACGATGCT
CGGCGTCTCG CTGGCCGCCT GGTGGCCGGC CGGCATCGCC TTCGCGATCG TCTGGCTGGC
GATGCTGGCG TTGACGCGGC GCTCCTCGGT CGGCGGCCTC TCGGGCGCCG TGACCGCGCC
GATCGCGGCG GCGGCGGGCG GGCAGTCCGA CGCGGTGCTG GTGATGCTCG CCATGGCGCT
GTTCGTCGTC TGGAAGCATC GCGGCAACAT CACCCGCCTG CTCGACGGCA CCGAGCCGAG
GGTCGGCGAG CGCTGATCGG GACGGCCGAT CTGGACGGGA ACGAACGCCT TGCCCGGCTG
CGGCTGATCC GCACGCCCCG CATCGGCCCC GTCGCCTATT CGCAGCTCAT CCGCCGCTTC
GGCAGCGGCG TCGAGGCGCT GGCCGCCTTG CCCGCGCTCG CCCGGCGCGG CGGCGGTGCG
TTGCCCGCCA TCCCGCCGTC GGCCGCCGCC GAGGCGGAGG CCGATCGCGT CGCCCGGCTG
GGCGCGCGCC ATCTGTTTCG CGGCGAGGCC GGCTATCCGG CGCTGCTCGA CCGGATCGAC
ACCGCGCCGC CCGTGCTGAT CGTCCGCGGC GACATCGCGC TGCTCGATCG CCGCATCGTC
GCGATCGTCG GCGCGCGCAA CGCCAGCGGC GCGGCGGTCC GCTTCGCGCG GACCCTGGCG
CACGGCCTGG GGGAGGCGGG GTGGCTGGTC GTCTCGGGCC TGGCGCGGGG GATCGACACC
GCGGCGCATG CCGGGTCGAT CGCGACCGGC ACGGCGGCGG TGATCGCCGG CGGCATCGAT
ATCGTCTACC CGCCGGAGAA TGCGGCGTTG CAGGAGGCGA TCGCCGAGCG CGGCCTGCTG
ATCGCCGAGC AGCCGCCCGG CGTCGAGCCG CGCGCGCGGC ACTTCCCCTA TCGCAACCGG
ATCATCGCCG GGCTGGCGGC GGGCACGGTG GTGGTCGAGG CGGCGCCCAA ATCGGGATCG
CTGATCACCG CGCGGCTCGC CGCCGAGTTC GGACGCGAGG TGATGGCGGT GCCCGGATCG
CCGCTCGACC CGCGCGCGCA AGGCTGCAAC CTGCTGATCC GGGAGGGCGC CACCCTGATC
CAGTCGGCCG CCGACATCGC CGAGGCGCTG AGCCCGATCG CCGGCGTCGC CGCCCGGCCC
GCCGACAACT TCGCGTCCGC GCCCGCGCCG GCCGAGGCGG ACGAGCCGGC GCGCGCCGCG
CTGACCGGCC TGCTGGGTCC CGTGCCGCTG GCGGTCGACG AACTGATCCG GCAGAGCGGC
GTCTCCGCCG CGATGGTGCA GATGGTGCTG CTCGAACTCG AACTGGGCGG CCGGCTCGAT
CGCCATGCCG GCGGGCGGGT CAGCCTGATC GCCTCTTGA
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| Protein sequence | MPVTLCISAC CAGDGFDYGA RAIRGDTVLH AVHDHHPAAD RGVSAGFDSV RGRADAARRR
RRPAPDRLGQ YRRDQRPAHR PQGAGGGDAA ARWWQGRGGG ADRADGAARH GAVGGRGGVH
RPSLSGLAEV QRRQGGGDDA RRLAGRLVAG RHRLRDRLAG DAGVDAALLG RRPLGRRDRA
DRGGGGRAVR RGAGDARHGA VRRLEASRQH HPPARRHRAE GRRALIGTAD LDGNERLARL
RLIRTPRIGP VAYSQLIRRF GSGVEALAAL PALARRGGGA LPAIPPSAAA EAEADRVARL
GARHLFRGEA GYPALLDRID TAPPVLIVRG DIALLDRRIV AIVGARNASG AAVRFARTLA
HGLGEAGWLV VSGLARGIDT AAHAGSIATG TAAVIAGGID IVYPPENAAL QEAIAERGLL
IAEQPPGVEP RARHFPYRNR IIAGLAAGTV VVEAAPKSGS LITARLAAEF GREVMAVPGS
PLDPRAQGCN LLIREGATLI QSAADIAEAL SPIAGVAARP ADNFASAPAP AEADEPARAA
LTGLLGPVPL AVDELIRQSG VSAAMVQMVL LELELGGRLD RHAGGRVSLI AS
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