Gene Swit_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3786 
Symbol 
ID5200266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4155799 
End bp4156287 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content75% 
IMG OID640583341 
Productdihydrofolate reductase 
Protein accessionYP_001264269 
Protein GI148556687 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.852274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.1214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGC CCGAAATCGT CTTCGTCCTC GCCCGCGCGC GCAACGGGGT GATCGGCCGC 
GACGGCGACC TGCCGTGGCG CATCCCGGCC GACCTCAGGC ATTTCAAGGC GCTGACCCAG
GGCGCGCCGA TGCTGATGGG GCGCAAGACC TTCGAGAGCC TTCCCGGCCT GCTGCCCGGC
CGCCGCCACA TCGTCCTGAC CCGCGATCGC GACTGGCGCG CCGAGGGCGC CGAGGTGACG
CACAGCGTCG ACGCCGCGGT CGCGCTGGCC GATGCCGACC GCCTGTCCGT GGTCGGCGGC
GCCGAGATCT ACGCTCTGTT GCTGCCGCGC GCCGACCGGA TCGAGCTGAC CGAGGTCGAC
GACGCGCCCG AGGGCGACAC CGTCGTCCCC GCCTTCGACC CCGCCGTCTG GCGCGAGGAC
GCCCGCGAGG CGCATCCGGC GGCGGACGGG AAGCCCGCCT TCGCCTTCGT CACGCTGCGG
CGGCGGTAG
 
Protein sequence
MSRPEIVFVL ARARNGVIGR DGDLPWRIPA DLRHFKALTQ GAPMLMGRKT FESLPGLLPG 
RRHIVLTRDR DWRAEGAEVT HSVDAAVALA DADRLSVVGG AEIYALLLPR ADRIELTEVD
DAPEGDTVVP AFDPAVWRED AREAHPAADG KPAFAFVTLR RR