Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3767 |
Symbol | |
ID | 5197218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4134439 |
End bp | 4136073 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640583322 |
Product | amidohydrolase 3 |
Protein accession | YP_001264250 |
Protein GI | 148556668 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG GTTCGATGGC CCTTCTGGCC GTGCTTCTGG CGAGCGGCGC GAAGCTGTCG GCGGAGCCCG TCGCCGACAC CGTCTATCGC CACGGCCGTA TCTACACCGT CGATCGCGCG CATCCCTGGG CGGACGCCGT CGCGATCAAG GACGGCAAAT TCTCCTATGT CGGCACCGAC AAGGGCGTGC AGGCCTATAT CGGCGGCACC ACCAAGGTGA TCGACCTCGC CGGCAAATTC GCGATGCCGG GCCTCCACGA CGCGCACCAG CACATGCTCA AGGGCGAGGC GCGCTACATC TATTGCCAGA TCGCGCCGGA AAGCCGGATC GAACAGATCG TCGCCAGCCT GAAATCCTGC TCGAAGGACC GGCAATATGG CGGCTGGATC GTCGCCGACG TCTATCGCGG CGACCTGTTC CCCGATGGCC ATGCCGACCG CAAATATCTC GACGCGGCCT TTCCCGACAC GCCCGTCTAC ATCCGCGAAT GGTCCTATCA TCACGGCCTC GCCAACACGA AGGCCCTCCA GATCGCGGGC GTCGACCGCG CCACGGCCGA TCCCGAGGGC GGCCGGGTGC TGCACCGCGC CGACGGCGAG CCGACCGGCG AGTTCCTCTC CAAGGCGACC TGGCTGATCA CCCAGCACAT CCCCGCATTG CCCGCCGCGA CGGTCGACGA GGCGTTGCTG CGCACCGCCG CGCTCTGCGC CGAATATGGC ATCACCTCCG CGCAGGAGGC GACCGCGTCG CGCCAGATGC TCGAGGAGAT GCGCAAGCTC GACCTCGCCG GCAAATGGAC GCTGCGCACC GCCACCCACA TCGTCTGGGG CAACCCGGCG AGCGCGCTGA TGCCGCCGCA GGAGACCGAG GAGGTGATCG CCCACCGCAA GGACTATGCG ACGTCGCACA TCTTCACCGA TTTCGTGAAG ATCTACGTCG ACGGCAGCCC GTTGCAGCCC CATTCGACCG ACGTCGAGCT CGACGATCAC GGCGAGGTCG CGGTCGCGCG CCTCTACGAG AAGCCCGCCG TGCTCAACGC CGCGCTGACC CGGTTCGACA AGATGGGCAT CAAGGTGAAG ATGCACGCCG TCGGATCGGG CGCGATCCGC ACCGCGCTCG ACGCGATCGA GGCCGCCCGC ACCGCCAACG GCAATTCGGG CATCCTCCAC GACGTCGCGC ACAGCCTGCG CTATTCGCCG CAGGACATCG ATCGCCCGGC CAGGCTCGGC GCGGTCGGCG AGATGTCGCC GGCGATCTGG CAGATCAAGG GGCCGCTGAC CAAGAACCTG GCCGGGGCCT GGCCGTTCAA GTCGCTGCTC GCGCGCGGCA CGCTGATGAC GCTGGGCAGC GACTGGGTCG TGCTGCCGGC GCCGAACCTG TTCCCGGCGA TCGGCGGCAT GCTCGATCAC GGCCCGGAAT CGATCGGCCT CAAGGACGCG ATCGAGATCG CGACGATCAA CGGCGCCAAG TCGGTCGGCT GGGACAAGGT CAACGGATCG ATCGAGGTGG GCAAGTTCGC CAACATGATC GTGCTCGACC GCGACCTGTT CAAGATCCCC GCCGCCGACA TCGGCGAGAC CAAGGTCCTG TCGACCGTCT TCGAGGGACG CGAGGTCTAC GCCCGGCCGC AATGA
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Protein sequence | MKIGSMALLA VLLASGAKLS AEPVADTVYR HGRIYTVDRA HPWADAVAIK DGKFSYVGTD KGVQAYIGGT TKVIDLAGKF AMPGLHDAHQ HMLKGEARYI YCQIAPESRI EQIVASLKSC SKDRQYGGWI VADVYRGDLF PDGHADRKYL DAAFPDTPVY IREWSYHHGL ANTKALQIAG VDRATADPEG GRVLHRADGE PTGEFLSKAT WLITQHIPAL PAATVDEALL RTAALCAEYG ITSAQEATAS RQMLEEMRKL DLAGKWTLRT ATHIVWGNPA SALMPPQETE EVIAHRKDYA TSHIFTDFVK IYVDGSPLQP HSTDVELDDH GEVAVARLYE KPAVLNAALT RFDKMGIKVK MHAVGSGAIR TALDAIEAAR TANGNSGILH DVAHSLRYSP QDIDRPARLG AVGEMSPAIW QIKGPLTKNL AGAWPFKSLL ARGTLMTLGS DWVVLPAPNL FPAIGGMLDH GPESIGLKDA IEIATINGAK SVGWDKVNGS IEVGKFANMI VLDRDLFKIP AADIGETKVL STVFEGREVY ARPQ
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