| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3760 |
|---|
| Symbol | |
|---|
| ID | 5196278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4124540 |
|---|
| End bp | 4125520 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640583315 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_001264243 |
|---|
| Protein GI | 148556661 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATG AGGCCGCGCC GATCCCGGTG CTGCTCGTCA CCGGCTTCCT GGGGGCGGGC
AAGACGACGC TGATCGGGCG GATGCTCGAC GACCCCGCCT TCGCCGGCAG CGCGTTGCTG
GTCAACGAGG TGGGCGAGAT CGGGATCGAC CAGGAGCTGC TGGTCCGCAG CGGATCGCCG
CCGCCGCAAC TGCTCGCCAA TGGCTGCGTC TGCTGCGTCA TGAACGACGA TCTCGGCCTG
GCGCTGCGCG ATCTCGACCT GCGACGGCGC GACGGTTCGA TCCCGCCCTT CGCGCGGGTG
ATCGTCGAGA CGACCGGCGT CGCCGATCCG GCGCCGATCC TGGCGCGCTT CATCGCCGAC
GGCTGGATCC AGCGGCACTT CGTGCTGAGC GCGGTGATCA CCCTGGTCGA CGGCGTGCTG
GGGGCGGCGA CGCTGCGCAG CCAGCCCGAG GCGGCGAGCC AGGCGGCGCA TGCCGACGCC
ATACTGATCA GCAAGGCCGA TCTGGCGGAT AGTGGCGCGG TCGACGGCTT GCGCGACCTG
CTGGCGGCGA CCGCGCCGCA CGCGACGATC CTGGTCGCGG GCTCGGAGGA CGCGGCGGTC
GGTCGGCTAC TGGAGCCGTT CCGCCTGCTC GGGCTGCGGG CGCCGCCGGA CCATGATGAC
CACCACCACG ACCATGCGCT CGTCACCACG GCCTCGTGGC GCTTCGACGA CGTGCTGCCC
TGGCCGGTGA TCGCCGGTGC GCTCGACGAT GTCGTCACCG CGCATCGCGG GCGGCTGATG
CGGATCAAGG GGCTGCTGCG GGTCCGCGAC ACCGACCGGC CGGTGGTGAT CGACGGCGTG
CAGGACCTGT TCCACCCGCC GCGCCTGCTC GACCGCTGGC CGAGCGACGA CCGGTCGAGC
CGGATCGTGA TGATCAGCCG CGATGCGAGC AGCGAGGAAG CGATGCGCGC GCTTCGGCGC
GCGCTGGTTC CTATCAGCTA G
|
|---|
| Protein sequence | MPDEAAPIPV LLVTGFLGAG KTTLIGRMLD DPAFAGSALL VNEVGEIGID QELLVRSGSP
PPQLLANGCV CCVMNDDLGL ALRDLDLRRR DGSIPPFARV IVETTGVADP APILARFIAD
GWIQRHFVLS AVITLVDGVL GAATLRSQPE AASQAAHADA ILISKADLAD SGAVDGLRDL
LAATAPHATI LVAGSEDAAV GRLLEPFRLL GLRAPPDHDD HHHDHALVTT ASWRFDDVLP
WPVIAGALDD VVTAHRGRLM RIKGLLRVRD TDRPVVIDGV QDLFHPPRLL DRWPSDDRSS
RIVMISRDAS SEEAMRALRR ALVPIS
|
|---|
| |