| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3752 |
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| Symbol | |
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| ID | 5197013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4113743 |
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| End bp | 4115011 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640583307 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001264235 |
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| Protein GI | 148556653 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.538338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCA GCAAGCTGAC CAAGCGCGCG GTCGATGCGC TCGTGCCGCC GTCGAAAAAG
CAGACCGTGC TTTGGGATAC CGAGCTGAAA GGCTTCGGCG TGCGCGTGCT GCCGTCCGGC
CTCAAGACGT TCATCGTCCA GTATCGCAAC GCCGAGGGCA TCAAGCGCCG CATCAATATC
GCGCGCTATG GCGTGCTGAC GGTCGATCAG GCACGCGACC AGGCCAAGCT CAAGCTGGCG
GCCGTGATCG GCGGCGAAGA CCCCGCCGAT GAGGTTCGCC AGGCGCGCAA GGGAATGACG
GTCGAGGAGA TGTGCGACTG GTATCTGACC GAGGCTCGGG CGGGCAATAT CCTCGGCCGC
AAGAACCTGC CGATCAAGAA ATCGTCGCTC GACATGGATG AGAGCCGCAT CAAGACGCAT
ATCAAGCCGC TCCTGGGCAA GCGGATCGTC AAGCATCTGA CGATCGCTGA TGTCGAGCAG
ATGCAGACCG ATGTGAAGGA CGGGAAGACG GCGAAGCCGC GCAGCGGCGG CCGGGGCGGC
ATGGCGACCG GCGGCGCCGG TGTGGCGGCG CGCTGCGTCG GCACGCTCCA GGCCATCATC
GGGCATGCGA AGCATAAGGG CCTGCTGGAC GCTCACCCGA CGCAGGGAGC GAAGAAGCTG
GCCGGTAAGA AGAAGACCCG GCGCCTGAAC GTCGCCGAGA TAGTGTTGAT GGGCAAGGCG
ATGGCCTATG CGGAGCGCAA TGGCGAGAAC CCTGTCGCCC TCGGCGTGCT GCGCACGCTC
TTGCTGACCG GATACCGCCG TGAGGAAGGC CAAGCGATGC ACCGAGCCTG GGTCAATGGA
GCCGGCGGCT ATGTGGCATT CCCCGACACC AAGGGCGGCG CGCAGATTCG TGCGATCGGC
CCTGCGGCCG TCAAGGCCGT CGAGAGCCAG CCGGTGATCG TGGGCAATCC GCACGCTTTC
CCCTCGGAAG TCGGGCGGGG GCCATTCACC GCAGTCAGCG CCTGCCTCCA GCGCGTTGCC
AAGCTGGCGG GGATAGAGGG CATTACGCCG CACACGCTGC GCCACACCTT CGGCAGCGTG
GCGGGCGATC TCGGTTTCTC GGAGCTGACG ATCCGCGCCA TGCTTGGCCA TGCCTCGCAG
AACGTCACCC AAGACTACAT CCACATCGAC GAGGCGCTCA AGCTCGCCGT GCGGCGAACG
TCCGACGAGA TCGAACGGCT GCTTGCGGAG GGCGCGGCTA AATCGACACA ACTCCAGCTT
GCGGCATGA
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| Protein sequence | MPTSKLTKRA VDALVPPSKK QTVLWDTELK GFGVRVLPSG LKTFIVQYRN AEGIKRRINI
ARYGVLTVDQ ARDQAKLKLA AVIGGEDPAD EVRQARKGMT VEEMCDWYLT EARAGNILGR
KNLPIKKSSL DMDESRIKTH IKPLLGKRIV KHLTIADVEQ MQTDVKDGKT AKPRSGGRGG
MATGGAGVAA RCVGTLQAII GHAKHKGLLD AHPTQGAKKL AGKKKTRRLN VAEIVLMGKA
MAYAERNGEN PVALGVLRTL LLTGYRREEG QAMHRAWVNG AGGYVAFPDT KGGAQIRAIG
PAAVKAVESQ PVIVGNPHAF PSEVGRGPFT AVSACLQRVA KLAGIEGITP HTLRHTFGSV
AGDLGFSELT IRAMLGHASQ NVTQDYIHID EALKLAVRRT SDEIERLLAE GAAKSTQLQL
AA
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