| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3750 |
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| Symbol | |
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| ID | 5196602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4110908 |
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| End bp | 4113133 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640583305 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264233 |
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| Protein GI | 148556651 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATT TGCATTTTGC CGCGCGGCGC GCGGCACCTG TGGCGCGTGC TTCTGCCGGC
GCTACCGCTT TCAAGACCCG CCTGGCACGC GATATTGCTG CCCCCGCCTT CGTCGCAGCG
CTGGCCTGCT GCCCGCTCTC GCCGGCCTTT GCACAGGATG GCATTGTGCT GCCGGAGGTC
GATGTGGACT CGGCCAGCGA AGCGCCGTCG ACGGGATCGG GCGAAAGGAT CTCCTCATCT
CGCCTCCGCA ACCTTCAGGC CGGCTCGAGT GATACTGCCG CCATTCTTCA AAGCGTGCCA
GGTGTCAGCG GCTTCGGCGC CGGGGGCTTT TCGACCCTGC CGGTGATCCG CGGCTTGGAG
GCGCAGCGCC TGACCGTGCT CGTCGACGGC GTGGCGATCG CCTCGGCCTG CCCGAACGAT
ATGAATCCGC CCCTGTCCTA TACCGATCCG CAGACCGTGG GTGCGATCGA CGTCATTACG
GGCGTCTCGC CGGTCAGCTA TGGCGGCGAC AGCATCGGCG GGATCATCCG CGTCGAGAGC
GCTCCGCCCC GCTTCGCGAA ACAGGGCGAT ACGCTGCTGA CAGGTGAAAT CTCGGCCTTC
TATCGCAGCA ATGGCGATGG CTTCGGCGGT TCGCTTTCAA TGACGGCCGC GAGCGACAAG
ATCAGCCTGA CCTATAACGG CTCCTATACC CAGGCCGACA ATTTCAAGGG CGGTGGATCG
CTGGGCATCG TGCGATCGAG CGAATATGCA AAGACCGATC ACAGCCTGAG CCTGGCCGCG
CAGGTCGGCA GCGGCTTGGT CGAGCTGAAG GGCGGCTATC ATTTCGCGCC CTACGAGGGG
TTTCCCAACC AATATATGGA CATGACGTCC AACAAGTCCT GGTTCCTGAA CGGGCACTAT
GCAGGCGTCT TCGATTGGGG CAATCTCGAT GTGCGGGCGA GTTGGCGCGA CACCGACCAT
GCCATGAACT TTCTCGCCGA TAAGGGTGGG ACGGCTACTG GCGGAATGCC GATGAACACC
GAAGTCCATA GCGCCGGATA CGCGGTCCAG GCCGAAATCC TGCTGGGCGG TGCCGGAACG
CTGCGTCTCG GCAATGAATT CCAACACCAG TGGCTCAACG ATTTCTGGCC GCCCGTCGCG
GGAAACATGA TGATGGGGCC GAATGCTTTC ATCAACGTCA ACGGGGGGAA GCGCGATCGT
CTCGGCACAT TCCTCGAATG GGAAAAGAGC TGGGATCGCG GGTTCACGCT GGTCGCCGGC
ATCCGCAACG ATCAGGTCTG GATGAATACG GGGACGGTCG CGCCCTACGG CACCGGAATG
ATGCAGATGG CCGACGTGAT GGCGGCCGCC GCGTTCAATG CAGCCGACCG CAAGCGGCAC
GATAGCAATT GGAGCGGCAC GTTGCTTGCT CGATATGCGC TGTCGCCTCA TGCGGAAATC
GAGTTCGGCT ATGCCCGGAA GGTGCGTTCG CCGAATATCT ACGAACGGTA TAGCTGGGGC
CGCGGCGGCA TGGCGAGCCG GATGATCGGG TGGTTCGGGG ACGGGAATGG CTATGTCGGC
AACCTCGCGC TTCGCCCGGA AAAGGCGGAT ACGCTGAGCG CCGCTCTGTC GGTTCATGGC
GGCGGCAAGG ATGGCTGGTC GCTGAAGATC GCGCCTTATT TCACTCATGT TGACGACTAT
ATCGACGCCG TGAAGCTGGC GGACTTTACC GACACGGCGG GCAGACCGAC CGCTTTCGAT
CAATTGCAAT TCGCCAACCA GAAGGCGGAG ATTTATGGCA TCGACCTGTC GGCCGCCGTC
CCGCTCTGGT CGTCCTCATC GGCAGGGAGC GCACGACTGA CCGCGCGCGC GAGTTGGTTG
CATGGCGAGA ACCTGGCGGA CCATGGACCG CTCTATCACC AGATGCCGTT CAACGCGGCG
CTGGGGCTGG AACATAGGAT CGGCGGACTG GAAACCCGGA TTGACCTGAC CGTCGTCGGC
GAGAAGGATC GTGTCGATCC GACCCGCAAT GAGCCGCGAA CGGGAAGCTA TGCGCTGCTT
GACGTCCAGT TGGCCTATCG CATCGACAAT GTGCGATTGA CGCTCGGCGC GGACAATCTG
TTCGACGCGG CCTATTATGC TCCGCTCGGC GGGATGTCGC TCGGGGATCT GAAGGCGACC
GGCGTTCTTC GCCCGGTCCC GGGCCGGGGG CGGTCGGTCA ACGCAGGCGT CACGATCTCG
TTCTGA
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| Protein sequence | MTNLHFAARR AAPVARASAG ATAFKTRLAR DIAAPAFVAA LACCPLSPAF AQDGIVLPEV
DVDSASEAPS TGSGERISSS RLRNLQAGSS DTAAILQSVP GVSGFGAGGF STLPVIRGLE
AQRLTVLVDG VAIASACPND MNPPLSYTDP QTVGAIDVIT GVSPVSYGGD SIGGIIRVES
APPRFAKQGD TLLTGEISAF YRSNGDGFGG SLSMTAASDK ISLTYNGSYT QADNFKGGGS
LGIVRSSEYA KTDHSLSLAA QVGSGLVELK GGYHFAPYEG FPNQYMDMTS NKSWFLNGHY
AGVFDWGNLD VRASWRDTDH AMNFLADKGG TATGGMPMNT EVHSAGYAVQ AEILLGGAGT
LRLGNEFQHQ WLNDFWPPVA GNMMMGPNAF INVNGGKRDR LGTFLEWEKS WDRGFTLVAG
IRNDQVWMNT GTVAPYGTGM MQMADVMAAA AFNAADRKRH DSNWSGTLLA RYALSPHAEI
EFGYARKVRS PNIYERYSWG RGGMASRMIG WFGDGNGYVG NLALRPEKAD TLSAALSVHG
GGKDGWSLKI APYFTHVDDY IDAVKLADFT DTAGRPTAFD QLQFANQKAE IYGIDLSAAV
PLWSSSSAGS ARLTARASWL HGENLADHGP LYHQMPFNAA LGLEHRIGGL ETRIDLTVVG
EKDRVDPTRN EPRTGSYALL DVQLAYRIDN VRLTLGADNL FDAAYYAPLG GMSLGDLKAT
GVLRPVPGRG RSVNAGVTIS F
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